binaries/src/ViennaRNA/doc/html/duplex_8h_source.html

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  68 <h1>/homes/fmmarquesmadeira/Projects/jabaws/binaries/src/ViennaRNA/H/duplex.h</h1><a href="duplex_8h.html">Go to the documentation of this file.</a><div class="fragment"><pre class="fragment"><a name="l00001"></a>00001 <span class="preprocessor">#ifndef __VIENNA_RNA_PACKAGE_DUPLEX_H__</span>
  69 <a name="l00002"></a>00002 <span class="preprocessor"></span><span class="preprocessor">#define __VIENNA_RNA_PACKAGE_DUPLEX_H__</span>
  70 <a name="l00003"></a>00003 <span class="preprocessor"></span>
  71 <a name="l00004"></a>00004 <span class="preprocessor">#include &quot;<a class="code" href="data__structures_8h.html" title="All datastructures and typedefs shared among the Vienna RNA Package can be found...">data_structures.h</a>&quot;</span>
  72 <a name="l00005"></a>00005
  73 <a name="l00012"></a>00012 <a class="code" href="structduplexT.html">duplexT</a> duplexfold( <span class="keyword">const</span> <span class="keywordtype">char</span> *s1,
  74 <a name="l00013"></a>00013                     <span class="keyword">const</span> <span class="keywordtype">char</span> *s2);
  75 <a name="l00014"></a>00014
  76 <a name="l00015"></a>00015 <a class="code" href="structduplexT.html">duplexT</a> *duplex_subopt( <span class="keyword">const</span> <span class="keywordtype">char</span> *s1,
  77 <a name="l00016"></a>00016                         <span class="keyword">const</span> <span class="keywordtype">char</span> *s2,
  78 <a name="l00017"></a>00017                         <span class="keywordtype">int</span> delta,
  79 <a name="l00018"></a>00018                         <span class="keywordtype">int</span> w);
  80 <a name="l00019"></a>00019
  81 <a name="l00020"></a>00020 <a class="code" href="structduplexT.html">duplexT</a> aliduplexfold(<span class="keyword">const</span> <span class="keywordtype">char</span> *s1[],
  82 <a name="l00021"></a>00021                       <span class="keyword">const</span> <span class="keywordtype">char</span> *s2[]);
  83 <a name="l00022"></a>00022
  84 <a name="l00023"></a>00023 <a class="code" href="structduplexT.html">duplexT</a> *aliduplex_subopt(<span class="keyword">const</span> <span class="keywordtype">char</span> *s1[],
  85 <a name="l00024"></a>00024                           <span class="keyword">const</span> <span class="keywordtype">char</span> *s2[],
  86 <a name="l00025"></a>00025                           <span class="keywordtype">int</span> delta,
  87 <a name="l00026"></a>00026                           <span class="keywordtype">int</span> w);
  88 <a name="l00027"></a>00027
  89 <a name="l00028"></a>00028 <span class="preprocessor">#endif</span>
  90 </pre></div></div>
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