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66 <a href="#pub-attribs">Data Fields</a>  </div>
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68 <div class="title">TwoDfold_solution Struct Reference</div>  </div>
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71
72 <p>Solution element returned from TwoDfoldList.  
73  <a href="structTwoDfold__solution.html#details">More...</a></p>
74 <table class="memberdecls">
75 <tr class="heading"><td colspan="2"><h2><a name="pub-attribs"></a>
76 Data Fields</h2></td></tr>
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78 int&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structTwoDfold__solution.html#a298767110e07490d361bf7da920fd153">k</a></td></tr>
79 <tr class="memdesc:a298767110e07490d361bf7da920fd153"><td class="mdescLeft">&#160;</td><td class="mdescRight">Distance to first reference. <br/></td></tr>
80 <tr class="memitem:a64fb28259cf925c3bba7b8d14592363a"><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a64fb28259cf925c3bba7b8d14592363a"></a>
81 int&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structTwoDfold__solution.html#a64fb28259cf925c3bba7b8d14592363a">l</a></td></tr>
82 <tr class="memdesc:a64fb28259cf925c3bba7b8d14592363a"><td class="mdescLeft">&#160;</td><td class="mdescRight">Distance to second reference. <br/></td></tr>
83 <tr class="memitem:a3f65891d0c931f88440150bb32bcf753"><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a3f65891d0c931f88440150bb32bcf753"></a>
84 float&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structTwoDfold__solution.html#a3f65891d0c931f88440150bb32bcf753">en</a></td></tr>
85 <tr class="memdesc:a3f65891d0c931f88440150bb32bcf753"><td class="mdescLeft">&#160;</td><td class="mdescRight">Free energy in kcal/mol. <br/></td></tr>
86 <tr class="memitem:ac87e00bbdb13e0b6ef45c4f65608b416"><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="ac87e00bbdb13e0b6ef45c4f65608b416"></a>
87 char *&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structTwoDfold__solution.html#ac87e00bbdb13e0b6ef45c4f65608b416">s</a></td></tr>
88 <tr class="memdesc:ac87e00bbdb13e0b6ef45c4f65608b416"><td class="mdescLeft">&#160;</td><td class="mdescRight">MFE representative structure in dot-bracket notation. <br/></td></tr>
89 </table>
90 <hr/><a name="details" id="details"></a><h2>Detailed Description</h2>
91 <div class="textblock"><p>Solution element returned from TwoDfoldList. </p>
92 <p>This element contains free energy and structure for the appropriate kappa (k), lambda (l) neighborhood The datastructure contains two integer attributes 'k' and 'l' as well as an attribute 'en' of type float representing the free energy in kcal/mol and an attribute 's' of type char* containg the secondary structure representative,</p>
93 <p>A value of <a class="el" href="energy__const_8h.html#a12c2040f25d8e3a7b9e1c2024c618cb6">INF</a> in k denotes the end of a list</p>
94 <dl class="section see"><dt>See also:</dt><dd><a class="el" href="group__kl__neighborhood__mfe.html#ga47da790166020558d27323aef489703e" title="Compute MFE&#39;s and representative for distance partitioning.">TwoDfoldList()</a> </dd></dl>
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