f25d3b35c4c86c758c9f9c051b0392dc4618c899
[jabaws.git] / binaries / src / ViennaRNA / doc / html / structTwoDfold__solution.html
1 <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
2 <html xmlns="http://www.w3.org/1999/xhtml">
3 <head>
4 <meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
5 <title>RNAlib-2.1.2: TwoDfold_solution Struct Reference</title>
6 <link href="tabs.css" rel="stylesheet" type="text/css"/>
7 <link href="doxygen.css" rel="stylesheet" type="text/css"/>
8 </head>
9 <body>
10 <!-- Generated by Doxygen 1.6.1 -->
11 <script type="text/javascript">
12 <!--
13 function changeDisplayState (e){
14   var num=this.id.replace(/[^[0-9]/g,'');
15   var button=this.firstChild;
16   var sectionDiv=document.getElementById('dynsection'+num);
17   if (sectionDiv.style.display=='none'||sectionDiv.style.display==''){
18     sectionDiv.style.display='block';
19     button.src='open.gif';
20   }else{
21     sectionDiv.style.display='none';
22     button.src='closed.gif';
23   }
24 }
25 function initDynSections(){
26   var divs=document.getElementsByTagName('div');
27   var sectionCounter=1;
28   for(var i=0;i<divs.length-1;i++){
29     if(divs[i].className=='dynheader'&&divs[i+1].className=='dynsection'){
30       var header=divs[i];
31       var section=divs[i+1];
32       var button=header.firstChild;
33       if (button!='IMG'){
34         divs[i].insertBefore(document.createTextNode(' '),divs[i].firstChild);
35         button=document.createElement('img');
36         divs[i].insertBefore(button,divs[i].firstChild);
37       }
38       header.style.cursor='pointer';
39       header.onclick=changeDisplayState;
40       header.id='dynheader'+sectionCounter;
41       button.src='closed.gif';
42       section.id='dynsection'+sectionCounter;
43       section.style.display='none';
44       section.style.marginLeft='14px';
45       sectionCounter++;
46     }
47   }
48 }
49 window.onload = initDynSections;
50 -->
51 </script>
52 <div class="navigation" id="top">
53   <div class="tabs">
54     <ul>
55       <li><a href="main.html"><span>Main&nbsp;Page</span></a></li>
56       <li><a href="pages.html"><span>Related&nbsp;Pages</span></a></li>
57       <li><a href="modules.html"><span>Modules</span></a></li>
58       <li class="current"><a href="annotated.html"><span>Data&nbsp;Structures</span></a></li>
59       <li><a href="files.html"><span>Files</span></a></li>
60     </ul>
61   </div>
62   <div class="tabs">
63     <ul>
64       <li><a href="annotated.html"><span>Data&nbsp;Structures</span></a></li>
65       <li><a href="classes.html"><span>Data&nbsp;Structure&nbsp;Index</span></a></li>
66       <li><a href="functions.html"><span>Data&nbsp;Fields</span></a></li>
67     </ul>
68   </div>
69 </div>
70 <div class="contents">
71 <h1>TwoDfold_solution Struct Reference</h1><!-- doxytag: class="TwoDfold_solution" -->
72 <p>Solution element returned from TwoDfoldList.  
73 <a href="#_details">More...</a></p>
74 <table border="0" cellpadding="0" cellspacing="0">
75 <tr><td colspan="2"><h2>Data Fields</h2></td></tr>
76 <tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a298767110e07490d361bf7da920fd153"></a><!-- doxytag: member="TwoDfold_solution::k" ref="a298767110e07490d361bf7da920fd153" args="" -->
77 int&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="structTwoDfold__solution.html#a298767110e07490d361bf7da920fd153">k</a></td></tr>
78 <tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">Distance to first reference. <br/></td></tr>
79 <tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a64fb28259cf925c3bba7b8d14592363a"></a><!-- doxytag: member="TwoDfold_solution::l" ref="a64fb28259cf925c3bba7b8d14592363a" args="" -->
80 int&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="structTwoDfold__solution.html#a64fb28259cf925c3bba7b8d14592363a">l</a></td></tr>
81 <tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">Distance to second reference. <br/></td></tr>
82 <tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a3f65891d0c931f88440150bb32bcf753"></a><!-- doxytag: member="TwoDfold_solution::en" ref="a3f65891d0c931f88440150bb32bcf753" args="" -->
83 float&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="structTwoDfold__solution.html#a3f65891d0c931f88440150bb32bcf753">en</a></td></tr>
84 <tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">Free energy in kcal/mol. <br/></td></tr>
85 <tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="ac87e00bbdb13e0b6ef45c4f65608b416"></a><!-- doxytag: member="TwoDfold_solution::s" ref="ac87e00bbdb13e0b6ef45c4f65608b416" args="" -->
86 char *&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="structTwoDfold__solution.html#ac87e00bbdb13e0b6ef45c4f65608b416">s</a></td></tr>
87 <tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">MFE representative structure in dot-bracket notation. <br/></td></tr>
88 </table>
89 <hr/><a name="_details"></a><h2>Detailed Description</h2>
90 <p>Solution element returned from TwoDfoldList. </p>
91 <p>This element contains free energy and structure for the appropriate kappa (k), lambda (l) neighborhood The datastructure contains two integer attributes 'k' and 'l' as well as an attribute 'en' of type float representing the free energy in kcal/mol and an attribute 's' of type char* containg the secondary structure representative,</p>
92 <p>A value of <a class="el" href="energy__const_8h.html#a12c2040f25d8e3a7b9e1c2024c618cb6">INF</a> in k denotes the end of a list</p>
93 <dl class="see"><dt><b>See also:</b></dt><dd><a class="el" href="group__kl__neighborhood__mfe.html#ga47da790166020558d27323aef489703e" title="Compute MFE&#39;s and representative for distance partitioning.">TwoDfoldList()</a> </dd></dl>
94 <hr/>The documentation for this struct was generated from the following file:<ul>
95 <li>/homes/fmmarquesmadeira/Projects/jabaws/binaries/src/ViennaRNA/H/<a class="el" href="data__structures_8h_source.html">data_structures.h</a></li>
96 </ul>
97 </div>
98 <hr size="1"/><address style="text-align: right;"><small>Generated on 11 Apr 2017 for RNAlib-2.1.2 by&nbsp;
99 <a href="http://www.doxygen.org/index.html">
100 <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.6.1 </small></address>
101 </body>
102 </html>