binaries/src/ViennaRNA/doc/latex/group__consensus__stochbt.tex

   1 \hypertarget{group__consensus__stochbt}{\section{Stochastic Backtracking of Consensus Structures from Sequence Alignment(s)}
   2 \label{group__consensus__stochbt}\index{Stochastic Backtracking of Consensus Structures from Sequence Alignment(s)@{Stochastic Backtracking of Consensus Structures from Sequence Alignment(s)}}
   3 }
   4 Collaboration diagram for Stochastic Backtracking of Consensus Structures from Sequence Alignment(s)\-:
   5 \nopagebreak
   6 \begin{figure}[H]
   7 \begin{center}
   8 \leavevmode
   9 \includegraphics[width=350pt]{group__consensus__stochbt}
  10 \end{center}
  11 \end{figure}
  12 \subsection*{Functions}
  13 \begin{DoxyCompactItemize}
  14 \item
  15 char $\ast$ \hyperlink{group__consensus__stochbt_ga0df40248788f0fb17ebdc59d74116d1c}{alipbacktrack} (double $\ast$prob)
  16 \begin{DoxyCompactList}\small\item\em Sample a consensus secondary structure from the Boltzmann ensemble according its probability\par
  17 . \end{DoxyCompactList}\end{DoxyCompactItemize}
  18
  19
  20 \subsection{Detailed Description}
  21
  22
  23 \subsection{Function Documentation}
  24 \hypertarget{group__consensus__stochbt_ga0df40248788f0fb17ebdc59d74116d1c}{\index{Stochastic Backtracking of Consensus Structures from Sequence Alignment(s)@{Stochastic Backtracking of Consensus Structures from Sequence Alignment(s)}!alipbacktrack@{alipbacktrack}}
  25 \index{alipbacktrack@{alipbacktrack}!Stochastic Backtracking of Consensus Structures from Sequence Alignment(s)@{Stochastic Backtracking of Consensus Structures from Sequence Alignment(s)}}
  26 \subsubsection[{alipbacktrack}]{\setlength{\rightskip}{0pt plus 5cm}char$\ast$ alipbacktrack (
  27 \begin{DoxyParamCaption}
  28 \item[{double $\ast$}]{prob}
  29 \end{DoxyParamCaption}
  30 )}}\label{group__consensus__stochbt_ga0df40248788f0fb17ebdc59d74116d1c}
  31
  32
  33 Sample a consensus secondary structure from the Boltzmann ensemble according its probability\par
  34 .
  35
  36
  37 \begin{DoxyParams}{Parameters}
  38 {\em prob} & to be described (berni) \\
  39 \hline
  40 \end{DoxyParams}
  41 \begin{DoxyReturn}{Returns}
  42 A sampled consensus secondary structure in dot-\/bracket notation
  43 \end{DoxyReturn}