2 * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9.0b2)
3 * Copyright (C) 2015 The Jalview Authors
5 * This file is part of Jalview.
7 * Jalview is free software: you can redistribute it and/or
8 * modify it under the terms of the GNU General Public License
9 * as published by the Free Software Foundation, either version 3
10 * of the License, or (at your option) any later version.
12 * Jalview is distributed in the hope that it will be useful, but
13 * WITHOUT ANY WARRANTY; without even the implied warranty
14 * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15 * PURPOSE. See the GNU General Public License for more details.
17 * You should have received a copy of the GNU General Public License
18 * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19 * The Jalview Authors are detailed in the 'AUTHORS' file.
21 package jalview.datamodel;
23 import java.util.Vector;
26 * Data model for an entry returned from a Uniprot query
28 * @see uniprot_mapping.xml
30 public class UniprotEntry
33 UniprotSequence sequence;
37 Vector<String> accession;
39 Vector<SequenceFeature> feature;
41 Vector<PDBEntry> dbrefs;
43 UniprotProteinName protName;
45 public void setAccession(Vector<String> items)
50 public void setFeature(Vector<SequenceFeature> items)
55 public Vector<SequenceFeature> getFeature()
60 public Vector<String> getAccession()
65 public void setProtein(UniprotProteinName names)
70 public UniprotProteinName getProtein()
75 public void setName(Vector<String> na)
80 public Vector<String> getName()
85 public UniprotSequence getUniprotSequence()
90 public void setUniprotSequence(UniprotSequence seq)
95 public Vector<PDBEntry> getDbReference()
100 public void setDbReference(Vector<PDBEntry> dbref)