package compbio.cassandra.readers; import java.util.Calendar; import java.util.List; import java.util.ArrayList; import com.datastax.driver.core.Row; import com.datastax.driver.core.Session; import com.datastax.driver.core.ResultSet; import compbio.cassandra.Pair; public class CassandraReaderExecutionTime { private Session session; public static String CASSANDRA_HOSTNAME = "localhost"; public static boolean READ_WEB_JPRED = false; public static boolean READ_LOCALFILE_JPRED = false; public void setSession(Session s) { assert s != null; session = s; } private void setConditions() { } public boolean JobisNotInsterted(String jobid) { ResultSet results1 = session.execute("SELECT * FROM ProteinLog WHERE JobID = '" + jobid + "';"); if (results1.isExhausted()) { return true; } return false; } public boolean JobisNotArchived(String jobid) { ResultSet results1 = session.execute("SELECT * FROM JpredArchive WHERE JobID = '" + jobid + "';"); if (results1.isExhausted()) { return true; } return false; } /* * getting data from the db */ public List> ReadProteinDataTable() { final long startTime = System.currentTimeMillis(); String com = "SELECT DataBegin,DataEnd FROM ProteinKeyspace.ProteinLog;"; System.out.println("Command: " + com); ResultSet results = session.execute(com); final long queryTime = System.currentTimeMillis(); List rows = results.all(); System.out.println("Query time is " + (queryTime - startTime) + " msec"); List> res = new ArrayList>(); int c = 0; for (Row r : rows) { Pair pair = new Pair(r.getString("DataBegin"), r.getString("DataEnd")); res.add(pair); ++c; } final long endTime = System.currentTimeMillis(); System.out.println(c + " rows analysed, execution time is " + (endTime - startTime) + " msec"); return res; } /* * getting earlest date of jobs from the db */ public long getEarliestDateInDB() { final long startTime = System.currentTimeMillis(); String com = "SELECT jobtime FROM ProteinKeyspace.ProteinData;"; System.out.println("Command: " + com); ResultSet results = session.execute(com); final long queryTime = System.currentTimeMillis(); System.out.println("Query time is " + (queryTime - startTime) + " msec"); Calendar cal = Calendar.getInstance(); long res = cal.getTimeInMillis(); int c = 0; while (!results.isExhausted()) { Row r = results.one(); long d1 = r.getLong("jobtime"); if (res > d1) { res = d1; } ++c; } final long endTime = System.currentTimeMillis(); System.out.println(c + " rows analysed, execution time is " + (endTime - startTime) + " msec"); return res; } }