What's new ?

Jalview 2.6 introduces new web services, and includes an updated version of the Jmol molecular graphics visualization system. See the release history for the full details.

Highlights in Jalview Version 2.6

• JABA Web Services for multiple alignment using:
  • ClustalW
  • MAFFT
  • Muscle
  • ProbCons
  • T-COFFEE
• User modifiable alignment service parameters
• Visualization of superposed structures associated with protein or nucleotide sequence alignments.
• Export coordinates and projection as CSV from PCA viewer

Issues Resolved (a select list - see release history for details)

• clustalx colourscheme colours Ds preferentially when both D+E are present in over 50% of the column
• Prevent sequence fetcher from replacing ',' for ';' when querying DAS sequence sources
• InstallAnywhere builds fail to launch on OS X java 10.5 update 4 (due to apple Java 1.6 update)

See the Release History page for details of all new features and resolved issues.