What's new in Jalview 2.10.1 ?

Jalview 2.10.1 was released on 24th November 2016. Full details are in the Jalview 2.10.1 Release Notes, but the highlights are below. This is also the first release to include contributions from Kira Mourão, who joined Jalview's core development team in October 2016.

• More memory efficient
  We've slimmed down the consensus analysis data structures used by Jalview so even wider alignments can be worked with.
• Select highlighted region
  Press 'B' or use the new menu option in the alignment window's Select menu to mark columns containing highlighted regions generated from structure selections, mouse-overs, or resulting from a Find operation.
• New custom link mechanism for opening URLs for database cross references.
  If you have customised URL links in your Jalview preferences, then you may already have seen the Update your links warning dialog.
• New command line export option for BioJS MSAviewer
  A number of small bugs with the HTML export functions from the Jalview desktop were also fixed.
• Small but significant changes to the physicochemical properties and consensus calculations
  Threonine is no longer considered a non-hydrophobic residue in the protein conservation calculation, and minor bugs addressed in PID and consensus colouring.