package jalview.api;

import jalview.datamodel.ColumnSelection;
import jalview.datamodel.SequenceI;
import jalview.schemes.ColourSchemeI;

public interface ComplexAlignFile
{
  public boolean isShowSeqFeatures();

  public ColourSchemeI getColourScheme();

  public ColumnSelection getColumnSelection();

  public SequenceI[] getHiddenSequences();

}