/* * This class was automatically generated with * Castor 0.9.6, using an XML * Schema. * $Id$ */ package jalview.schemabinding.version2; //---------------------------------/ //- Imported classes and packages -/ //---------------------------------/ import org.exolab.castor.xml.validators.*; /** * Class AnnotationDescriptor. * * @version $Revision$ $Date$ */ public class AnnotationDescriptor extends org.exolab.castor.xml.util.XMLClassDescriptorImpl { //--------------------------/ //- Class/Member Variables -/ //--------------------------/ /** * Field nsPrefix */ private java.lang.String nsPrefix; /** * Field nsURI */ private java.lang.String nsURI; /** * Field xmlName */ private java.lang.String xmlName; /** * Field identity */ private org.exolab.castor.xml.XMLFieldDescriptor identity; //----------------/ //- Constructors -/ //----------------/ public AnnotationDescriptor() { super(); nsURI = "www.vamsas.ac.uk/jalview/version2"; xmlName = "Annotation"; //-- set grouping compositor setCompositorAsSequence(); org.exolab.castor.xml.util.XMLFieldDescriptorImpl desc = null; org.exolab.castor.xml.XMLFieldHandler handler = null; org.exolab.castor.xml.FieldValidator fieldValidator = null; //-- initialize attribute descriptors //-- _graph desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang. Boolean.TYPE, "_graph", "graph", org.exolab.castor.xml.NodeType.Attribute); handler = (new org.exolab.castor.xml.XMLFieldHandler() { public java.lang.Object getValue(java.lang.Object object) throws IllegalStateException { Annotation target = (Annotation) object; if (!target.hasGraph()) { return null; } return (target.getGraph() ? java.lang.Boolean.TRUE : java.lang.Boolean.FALSE); } public void setValue(java.lang.Object object, java.lang.Object value) throws IllegalStateException, IllegalArgumentException { try { Annotation target = (Annotation) object; // ignore null values for non optional primitives if (value == null) { return; } target.setGraph( ( (java.lang.Boolean) value).booleanValue()); } catch (java.lang.Exception ex) { throw new IllegalStateException(ex.toString()); } } public java.lang.Object newInstance(java.lang.Object parent) { return null; } }); desc.setHandler(handler); desc.setRequired(true); addFieldDescriptor(desc); //-- validation code for: _graph fieldValidator = new org.exolab.castor.xml.FieldValidator(); fieldValidator.setMinOccurs(1); { //-- local scope BooleanValidator typeValidator = new BooleanValidator(); fieldValidator.setValidator(typeValidator); } desc.setValidator(fieldValidator); //-- _graphType desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang. Integer.TYPE, "_graphType", "graphType", org.exolab.castor.xml.NodeType.Attribute); handler = (new org.exolab.castor.xml.XMLFieldHandler() { public java.lang.Object getValue(java.lang.Object object) throws IllegalStateException { Annotation target = (Annotation) object; if (!target.hasGraphType()) { return null; } return new java.lang.Integer(target.getGraphType()); } public void setValue(java.lang.Object object, java.lang.Object value) throws IllegalStateException, IllegalArgumentException { try { Annotation target = (Annotation) object; // if null, use delete method for optional primitives if (value == null) { target.deleteGraphType(); return; } target.setGraphType( ( (java.lang.Integer) value).intValue()); } catch (java.lang.Exception ex) { throw new IllegalStateException(ex.toString()); } } public java.lang.Object newInstance(java.lang.Object parent) { return null; } }); desc.setHandler(handler); addFieldDescriptor(desc); //-- validation code for: _graphType fieldValidator = new org.exolab.castor.xml.FieldValidator(); { //-- local scope IntegerValidator typeValidator = new IntegerValidator(); fieldValidator.setValidator(typeValidator); } desc.setValidator(fieldValidator); //-- _sequenceRef desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang. String.class, "_sequenceRef", "sequenceRef", org.exolab.castor.xml.NodeType.Attribute); desc.setImmutable(true); handler = (new org.exolab.castor.xml.XMLFieldHandler() { public java.lang.Object getValue(java.lang.Object object) throws IllegalStateException { Annotation target = (Annotation) object; return target.getSequenceRef(); } public void setValue(java.lang.Object object, java.lang.Object value) throws IllegalStateException, IllegalArgumentException { try { Annotation target = (Annotation) object; target.setSequenceRef( (java.lang.String) value); } catch (java.lang.Exception ex) { throw new IllegalStateException(ex.toString()); } } public java.lang.Object newInstance(java.lang.Object parent) { return null; } }); desc.setHandler(handler); addFieldDescriptor(desc); //-- validation code for: _sequenceRef fieldValidator = new org.exolab.castor.xml.FieldValidator(); { //-- local scope StringValidator typeValidator = new StringValidator(); typeValidator.setWhiteSpace("preserve"); fieldValidator.setValidator(typeValidator); } desc.setValidator(fieldValidator); //-- _graphColour desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang. Integer.TYPE, "_graphColour", "graphColour", org.exolab.castor.xml.NodeType.Attribute); handler = (new org.exolab.castor.xml.XMLFieldHandler() { public java.lang.Object getValue(java.lang.Object object) throws IllegalStateException { Annotation target = (Annotation) object; if (!target.hasGraphColour()) { return null; } return new java.lang.Integer(target.getGraphColour()); } public void setValue(java.lang.Object object, java.lang.Object value) throws IllegalStateException, IllegalArgumentException { try { Annotation target = (Annotation) object; // if null, use delete method for optional primitives if (value == null) { target.deleteGraphColour(); return; } target.setGraphColour( ( (java.lang.Integer) value).intValue()); } catch (java.lang.Exception ex) { throw new IllegalStateException(ex.toString()); } } public java.lang.Object newInstance(java.lang.Object parent) { return null; } }); desc.setHandler(handler); addFieldDescriptor(desc); //-- validation code for: _graphColour fieldValidator = new org.exolab.castor.xml.FieldValidator(); { //-- local scope IntegerValidator typeValidator = new IntegerValidator(); fieldValidator.setValidator(typeValidator); } desc.setValidator(fieldValidator); //-- _graphGroup desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang. Integer.TYPE, "_graphGroup", "graphGroup", org.exolab.castor.xml.NodeType.Attribute); handler = (new org.exolab.castor.xml.XMLFieldHandler() { public java.lang.Object getValue(java.lang.Object object) throws IllegalStateException { Annotation target = (Annotation) object; if (!target.hasGraphGroup()) { return null; } return new java.lang.Integer(target.getGraphGroup()); } public void setValue(java.lang.Object object, java.lang.Object value) throws IllegalStateException, IllegalArgumentException { try { Annotation target = (Annotation) object; // if null, use delete method for optional primitives if (value == null) { target.deleteGraphGroup(); return; } target.setGraphGroup( ( (java.lang.Integer) value).intValue()); } catch (java.lang.Exception ex) { throw new IllegalStateException(ex.toString()); } } public java.lang.Object newInstance(java.lang.Object parent) { return null; } }); desc.setHandler(handler); addFieldDescriptor(desc); //-- validation code for: _graphGroup fieldValidator = new org.exolab.castor.xml.FieldValidator(); { //-- local scope IntegerValidator typeValidator = new IntegerValidator(); fieldValidator.setValidator(typeValidator); } desc.setValidator(fieldValidator); //-- _id desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang. String.class, "_id", "id", org.exolab.castor.xml.NodeType.Attribute); desc.setImmutable(true); handler = (new org.exolab.castor.xml.XMLFieldHandler() { public java.lang.Object getValue(java.lang.Object object) throws IllegalStateException { Annotation target = (Annotation) object; return target.getId(); } public void setValue(java.lang.Object object, java.lang.Object value) throws IllegalStateException, IllegalArgumentException { try { Annotation target = (Annotation) object; target.setId( (java.lang.String) value); } catch (java.lang.Exception ex) { throw new IllegalStateException(ex.toString()); } } public java.lang.Object newInstance(java.lang.Object parent) { return null; } }); desc.setHandler(handler); addFieldDescriptor(desc); //-- validation code for: _id fieldValidator = new org.exolab.castor.xml.FieldValidator(); { //-- local scope StringValidator typeValidator = new StringValidator(); typeValidator.setWhiteSpace("preserve"); fieldValidator.setValidator(typeValidator); } desc.setValidator(fieldValidator); //-- initialize element descriptors //-- _annotationElementList desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview. schemabinding.version2.AnnotationElement.class, "_annotationElementList", "annotationElement", org.exolab.castor.xml.NodeType.Element); handler = (new org.exolab.castor.xml.XMLFieldHandler() { public java.lang.Object getValue(java.lang.Object object) throws IllegalStateException { Annotation target = (Annotation) object; return target.getAnnotationElement(); } public void setValue(java.lang.Object object, java.lang.Object value) throws IllegalStateException, IllegalArgumentException { try { Annotation target = (Annotation) object; target.addAnnotationElement( (jalview.schemabinding.version2. AnnotationElement) value); } catch (java.lang.Exception ex) { throw new IllegalStateException(ex.toString()); } } public java.lang.Object newInstance(java.lang.Object parent) { return new jalview.schemabinding.version2.AnnotationElement(); } }); desc.setHandler(handler); desc.setNameSpaceURI("www.vamsas.ac.uk/jalview/version2"); desc.setMultivalued(true); addFieldDescriptor(desc); //-- validation code for: _annotationElementList fieldValidator = new org.exolab.castor.xml.FieldValidator(); fieldValidator.setMinOccurs(0); { //-- local scope } desc.setValidator(fieldValidator); //-- _label desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang. String.class, "_label", "label", org.exolab.castor.xml.NodeType.Element); desc.setImmutable(true); handler = (new org.exolab.castor.xml.XMLFieldHandler() { public java.lang.Object getValue(java.lang.Object object) throws IllegalStateException { Annotation target = (Annotation) object; return target.getLabel(); } public void setValue(java.lang.Object object, java.lang.Object value) throws IllegalStateException, IllegalArgumentException { try { Annotation target = (Annotation) object; target.setLabel( (java.lang.String) value); } catch (java.lang.Exception ex) { throw new IllegalStateException(ex.toString()); } } public java.lang.Object newInstance(java.lang.Object parent) { return null; } }); desc.setHandler(handler); desc.setNameSpaceURI("www.vamsas.ac.uk/jalview/version2"); desc.setRequired(true); desc.setMultivalued(false); addFieldDescriptor(desc); //-- validation code for: _label fieldValidator = new org.exolab.castor.xml.FieldValidator(); fieldValidator.setMinOccurs(1); { //-- local scope StringValidator typeValidator = new StringValidator(); typeValidator.setWhiteSpace("preserve"); fieldValidator.setValidator(typeValidator); } desc.setValidator(fieldValidator); //-- _description desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang. String.class, "_description", "description", org.exolab.castor.xml.NodeType.Element); desc.setImmutable(true); handler = (new org.exolab.castor.xml.XMLFieldHandler() { public java.lang.Object getValue(java.lang.Object object) throws IllegalStateException { Annotation target = (Annotation) object; return target.getDescription(); } public void setValue(java.lang.Object object, java.lang.Object value) throws IllegalStateException, IllegalArgumentException { try { Annotation target = (Annotation) object; target.setDescription( (java.lang.String) value); } catch (java.lang.Exception ex) { throw new IllegalStateException(ex.toString()); } } public java.lang.Object newInstance(java.lang.Object parent) { return null; } }); desc.setHandler(handler); desc.setNameSpaceURI("www.vamsas.ac.uk/jalview/version2"); desc.setMultivalued(false); addFieldDescriptor(desc); //-- validation code for: _description fieldValidator = new org.exolab.castor.xml.FieldValidator(); { //-- local scope StringValidator typeValidator = new StringValidator(); typeValidator.setWhiteSpace("preserve"); fieldValidator.setValidator(typeValidator); } desc.setValidator(fieldValidator); //-- _thresholdLine desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview. schemabinding.version2.ThresholdLine.class, "_thresholdLine", "thresholdLine", org.exolab.castor.xml.NodeType.Element); handler = (new org.exolab.castor.xml.XMLFieldHandler() { public java.lang.Object getValue(java.lang.Object object) throws IllegalStateException { Annotation target = (Annotation) object; return target.getThresholdLine(); } public void setValue(java.lang.Object object, java.lang.Object value) throws IllegalStateException, IllegalArgumentException { try { Annotation target = (Annotation) object; target.setThresholdLine( (jalview.schemabinding.version2. ThresholdLine) value); } catch (java.lang.Exception ex) { throw new IllegalStateException(ex.toString()); } } public java.lang.Object newInstance(java.lang.Object parent) { return new jalview.schemabinding.version2.ThresholdLine(); } }); desc.setHandler(handler); desc.setNameSpaceURI("www.vamsas.ac.uk/jalview/version2"); desc.setMultivalued(false); addFieldDescriptor(desc); //-- validation code for: _thresholdLine fieldValidator = new org.exolab.castor.xml.FieldValidator(); { //-- local scope } desc.setValidator(fieldValidator); } //-- jalview.schemabinding.version2.AnnotationDescriptor() //-----------/ //- Methods -/ //-----------/ /** * Method getAccessMode * * * * @return AccessMode */ public org.exolab.castor.mapping.AccessMode getAccessMode() { return null; } //-- org.exolab.castor.mapping.AccessMode getAccessMode() /** * Method getExtends * * * * @return ClassDescriptor */ public org.exolab.castor.mapping.ClassDescriptor getExtends() { return null; } //-- org.exolab.castor.mapping.ClassDescriptor getExtends() /** * Method getIdentity * * * * @return FieldDescriptor */ public org.exolab.castor.mapping.FieldDescriptor getIdentity() { return identity; } //-- org.exolab.castor.mapping.FieldDescriptor getIdentity() /** * Method getJavaClass * * * * @return Class */ public java.lang.Class getJavaClass() { return jalview.schemabinding.version2.Annotation.class; } //-- java.lang.Class getJavaClass() /** * Method getNameSpacePrefix * * * * @return String */ public java.lang.String getNameSpacePrefix() { return nsPrefix; } //-- java.lang.String getNameSpacePrefix() /** * Method getNameSpaceURI * * * * @return String */ public java.lang.String getNameSpaceURI() { return nsURI; } //-- java.lang.String getNameSpaceURI() /** * Method getValidator * * * * @return TypeValidator */ public org.exolab.castor.xml.TypeValidator getValidator() { return this; } //-- org.exolab.castor.xml.TypeValidator getValidator() /** * Method getXMLName * * * * @return String */ public java.lang.String getXMLName() { return xmlName; } //-- java.lang.String getXMLName() }