/* * Jalview - A Sequence Alignment Editor and Viewer (Version 2.6) * Copyright (C) 2010 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle * * This file is part of Jalview. * * Jalview is free software: you can redistribute it and/or * modify it under the terms of the GNU General Public License * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. * * Jalview is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty * of MERCHANTABILITY or FITNESS FOR A PARTICULAR * PURPOSE. See the GNU General Public License for more details. * * You should have received a copy of the GNU General Public License along with Jalview. If not, see . */ package jalview.schemabinding.version2; //---------------------------------/ //- Imported classes and packages -/ //---------------------------------/ import org.exolab.castor.xml.Marshaller; import org.exolab.castor.xml.Unmarshaller; /** * Class StructureState. * * @version $Revision$ $Date$ */ public class StructureState implements java.io.Serializable { // --------------------------/ // - Class/Member Variables -/ // --------------------------/ /** * internal content storage */ private java.lang.String _content = ""; /** * Field _visible. */ private boolean _visible; /** * keeps track of state for field: _visible */ private boolean _has_visible; /** * Field _xpos. */ private int _xpos; /** * keeps track of state for field: _xpos */ private boolean _has_xpos; /** * Field _ypos. */ private int _ypos; /** * keeps track of state for field: _ypos */ private boolean _has_ypos; /** * Field _width. */ private int _width; /** * keeps track of state for field: _width */ private boolean _has_width; /** * Field _height. */ private int _height; /** * keeps track of state for field: _height */ private boolean _has_height; /** * additional identifier which properly disambiguates the structure view from * any other view with the same attributes. This is not an ID, because it is * possible to have many references to the same physical structure view from * different sequences in an alignment. A structureState element citing the * same viewId will appear for each instance. */ private java.lang.String _viewId; // ----------------/ // - Constructors -/ // ----------------/ public StructureState() { super(); setContent(""); } // -----------/ // - Methods -/ // -----------/ /** */ public void deleteHeight() { this._has_height = false; } /** */ public void deleteVisible() { this._has_visible = false; } /** */ public void deleteWidth() { this._has_width = false; } /** */ public void deleteXpos() { this._has_xpos = false; } /** */ public void deleteYpos() { this._has_ypos = false; } /** * Returns the value of field 'content'. The field 'content' has the following * description: internal content storage * * @return the value of field 'Content'. */ public java.lang.String getContent() { return this._content; } /** * Returns the value of field 'height'. * * @return the value of field 'Height'. */ public int getHeight() { return this._height; } /** * Returns the value of field 'viewId'. The field 'viewId' has the following * description: additional identifier which properly disambiguates the * structure view from any other view with the same attributes. This is not an * ID, because it is possible to have many references to the same physical * structure view from different sequences in an alignment. A structureState * element citing the same viewId will appear for each instance. * * @return the value of field 'ViewId'. */ public java.lang.String getViewId() { return this._viewId; } /** * Returns the value of field 'visible'. * * @return the value of field 'Visible'. */ public boolean getVisible() { return this._visible; } /** * Returns the value of field 'width'. * * @return the value of field 'Width'. */ public int getWidth() { return this._width; } /** * Returns the value of field 'xpos'. * * @return the value of field 'Xpos'. */ public int getXpos() { return this._xpos; } /** * Returns the value of field 'ypos'. * * @return the value of field 'Ypos'. */ public int getYpos() { return this._ypos; } /** * Method hasHeight. * * @return true if at least one Height has been added */ public boolean hasHeight() { return this._has_height; } /** * Method hasVisible. * * @return true if at least one Visible has been added */ public boolean hasVisible() { return this._has_visible; } /** * Method hasWidth. * * @return true if at least one Width has been added */ public boolean hasWidth() { return this._has_width; } /** * Method hasXpos. * * @return true if at least one Xpos has been added */ public boolean hasXpos() { return this._has_xpos; } /** * Method hasYpos. * * @return true if at least one Ypos has been added */ public boolean hasYpos() { return this._has_ypos; } /** * Method isValid. * * @return true if this object is valid according to the schema */ public boolean isValid() { try { validate(); } catch (org.exolab.castor.xml.ValidationException vex) { return false; } return true; } /** * Returns the value of field 'visible'. * * @return the value of field 'Visible'. */ public boolean isVisible() { return this._visible; } /** * * * @param out * @throws org.exolab.castor.xml.MarshalException * if object is null or if any SAXException is thrown during * marshaling * @throws org.exolab.castor.xml.ValidationException * if this object is an invalid instance according to the schema */ public void marshal(final java.io.Writer out) throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException { Marshaller.marshal(this, out); } /** * * * @param handler * @throws java.io.IOException * if an IOException occurs during marshaling * @throws org.exolab.castor.xml.ValidationException * if this object is an invalid instance according to the schema * @throws org.exolab.castor.xml.MarshalException * if object is null or if any SAXException is thrown during * marshaling */ public void marshal(final org.xml.sax.ContentHandler handler) throws java.io.IOException, org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException { Marshaller.marshal(this, handler); } /** * Sets the value of field 'content'. The field 'content' has the following * description: internal content storage * * @param content * the value of field 'content'. */ public void setContent(final java.lang.String content) { this._content = content; } /** * Sets the value of field 'height'. * * @param height * the value of field 'height'. */ public void setHeight(final int height) { this._height = height; this._has_height = true; } /** * Sets the value of field 'viewId'. The field 'viewId' has the following * description: additional identifier which properly disambiguates the * structure view from any other view with the same attributes. This is not an * ID, because it is possible to have many references to the same physical * structure view from different sequences in an alignment. A structureState * element citing the same viewId will appear for each instance. * * @param viewId * the value of field 'viewId'. */ public void setViewId(final java.lang.String viewId) { this._viewId = viewId; } /** * Sets the value of field 'visible'. * * @param visible * the value of field 'visible'. */ public void setVisible(final boolean visible) { this._visible = visible; this._has_visible = true; } /** * Sets the value of field 'width'. * * @param width * the value of field 'width'. */ public void setWidth(final int width) { this._width = width; this._has_width = true; } /** * Sets the value of field 'xpos'. * * @param xpos * the value of field 'xpos'. */ public void setXpos(final int xpos) { this._xpos = xpos; this._has_xpos = true; } /** * Sets the value of field 'ypos'. * * @param ypos * the value of field 'ypos'. */ public void setYpos(final int ypos) { this._ypos = ypos; this._has_ypos = true; } /** * Method unmarshal. * * @param reader * @throws org.exolab.castor.xml.MarshalException * if object is null or if any SAXException is thrown during * marshaling * @throws org.exolab.castor.xml.ValidationException * if this object is an invalid instance according to the schema * @return the unmarshaled jalview.schemabinding.version2.StructureState */ public static jalview.schemabinding.version2.StructureState unmarshal( final java.io.Reader reader) throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException { return (jalview.schemabinding.version2.StructureState) Unmarshaller .unmarshal(jalview.schemabinding.version2.StructureState.class, reader); } /** * * * @throws org.exolab.castor.xml.ValidationException * if this object is an invalid instance according to the schema */ public void validate() throws org.exolab.castor.xml.ValidationException { org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator(); validator.validate(this); } }