/* * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) * Copyright (C) $$Year-Rel$$ The Jalview Authors * * This file is part of Jalview. * * Jalview is free software: you can redistribute it and/or * modify it under the terms of the GNU General Public License * as published by the Free Software Foundation, either version 3 * of the License, or (at your option) any later version. * * Jalview is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty * of MERCHANTABILITY or FITNESS FOR A PARTICULAR * PURPOSE. See the GNU General Public License for more details. * * You should have received a copy of the GNU General Public License * along with Jalview. If not, see . * The Jalview Authors are detailed in the 'AUTHORS' file. */ package jalview.util; import jalview.javascript.json.JSON; import java.awt.Color; import java.awt.Toolkit; import java.awt.event.MouseEvent; import java.io.BufferedReader; import java.io.File; import java.io.FileOutputStream; import java.io.FileReader; import java.io.IOException; import java.io.InputStream; import java.io.InputStreamReader; import java.io.Reader; import java.net.MalformedURLException; import java.net.URL; import java.util.Properties; import javax.swing.SwingUtilities; import org.json.simple.parser.JSONParser; import org.json.simple.parser.ParseException; import com.stevesoft.pat.Regex; /** * System platform information used by Applet and Application * * @author Jim Procter */ public class Platform { private static boolean isJS = /** @j2sNative true || */ false; private static Boolean isNoJSMac = null, isNoJSWin = null, isMac = null, isWin = null; // private static Boolean isHeadless = null; /** * added to group mouse events into Windows and nonWindows (mac, unix, linux) * * @return */ public static boolean isMac() { return (isMac == null ? (isMac = (System.getProperty("os.name").indexOf("Mac") >= 0)) : isMac); } /** * added to group mouse events into Windows and nonWindows (mac, unix, linux) * * @return */ public static boolean isWin() { return (isWin == null ? (isWin = (System.getProperty("os.name").indexOf("Win") >= 0)) : isWin); } /** * * @return true if HTML5 JavaScript */ public static boolean isJS() { return isJS; } /** * sorry folks - Macs really are different * * BH: disabled for SwingJS -- will need to check key-press issues * * @return true if we do things in a special way. */ public static boolean isAMacAndNotJS() { return (isNoJSMac == null ? (isNoJSMac = !isJS && isMac()) : isNoJSMac); } /** * Check if we are on a Microsoft plaform... * * @return true if we have to cope with another platform variation */ public static boolean isWindowsAndNotJS() { return (isNoJSWin == null ? (isNoJSWin = !isJS && isWin()) : isNoJSWin); } // /** // * // * @return true if we are running in non-interactive no UI mode // */ // public static boolean isHeadless() // { // if (isHeadless == null) // { // isHeadless = "true".equals(System.getProperty("java.awt.headless")); // } // return isHeadless; // } /** * * @return nominal maximum command line length for this platform */ public static int getMaxCommandLineLength() { // TODO: determine nominal limits for most platforms. return 2046; // this is the max length for a windows NT system. } /** * escape a string according to the local platform's escape character * * @param file * @return escaped file */ public static String escapeString(String file) { StringBuffer f = new StringBuffer(); int p = 0, lastp = 0; while ((p = file.indexOf('\\', lastp)) > -1) { f.append(file.subSequence(lastp, p)); f.append("\\\\"); lastp = p + 1; } f.append(file.substring(lastp)); return f.toString(); } /** * Answers true if the mouse event has Meta-down (Command key on Mac) or * Ctrl-down (on other o/s). Note this answers _false_ if the Ctrl key is * pressed instead of the Meta/Cmd key on Mac. To test for Ctrl-pressed on * Mac, you can use e.isPopupTrigger(). * * @param e * @return */ public static boolean isControlDown(MouseEvent e) { return isControlDown(e, isMac()); } /** * Overloaded version of method (to allow unit testing) * * @param e * @param aMac * @return */ protected static boolean isControlDown(MouseEvent e, boolean aMac) { if (!aMac) { return e.isControlDown(); } // answer false for right mouse button // shortcut key will be META for a Mac return !e.isPopupTrigger() && (Toolkit.getDefaultToolkit().getMenuShortcutKeyMask() & e.getModifiers()) != 0; // could we use e.isMetaDown() here? } // BH: I don't know about that previous method. Here is what SwingJS uses. // Notice the distinction in mouse events. (BUTTON3_MASK == META) // // private static boolean isPopupTrigger(int id, int mods, boolean isWin) { // boolean rt = ((mods & InputEvent.BUTTON3_MASK) != 0); // if (isWin) { // if (id != MouseEvent.MOUSE_RELEASED) // return false; //// //// // Oddly, Windows returns InputEvent.META_DOWN_MASK on release, though //// // BUTTON3_DOWN_MASK for pressed. So here we just accept both. //// //// actually, we can use XXX_MASK, not XXX_DOWN_MASK and avoid this issue, // because //// J2S adds the appropriate extended (0x3FC0) and simple (0x3F) modifiers. //// // return rt; // } else { // // mac, linux, unix // if (id != MouseEvent.MOUSE_PRESSED) // return false; // boolean lt = ((mods & InputEvent.BUTTON1_MASK) != 0); // boolean ctrl = ((mods & InputEvent.CTRL_MASK) != 0); // return rt || (ctrl && lt); // } // } // /** * Windows (not Mac, Linux, or Unix) and right button to test for the * right-mouse pressed event in Windows that would have opened a menu or a * Mac. * * @param e * @return */ public static boolean isWinRightButton(MouseEvent e) { // was !isAMac(), but that is true also for Linux and Unix and JS, return isWin() && SwingUtilities.isRightMouseButton(e); } /** * Windows (not Mac, Linux, or Unix) and middle button -- for mouse wheeling * without pressing the button. * * @param e * @return */ public static boolean isWinMiddleButton(MouseEvent e) { // was !isAMac(), but that is true also for Linux and Unix and JS return isWin() && SwingUtilities.isMiddleMouseButton(e); } public static boolean allowMnemonics() { return !isMac(); } public final static int TIME_RESET = 0; public final static int TIME_MARK = 1; public static final int TIME_SET = 2; public static final int TIME_GET = 3; public static long time, mark, set, duration; public static void timeCheck(String msg, int mode) { long t = System.currentTimeMillis(); switch (mode) { case TIME_RESET: time = mark = t; if (msg != null) { System.err.println("Platform: timer reset\t\t\t" + msg); } break; case TIME_MARK: if (set > 0) { duration += (t - set); } else { if (time == 0) { time = mark = t; } if (msg != null) { System.err.println("Platform: timer mark\t" + ((t - time) / 1000f) + "\t" + ((t - mark) / 1000f) + "\t" + msg); } mark = t; } break; case TIME_SET: set = t; break; case TIME_GET: if (msg != null) { System.err.println("Platform: timer dur\t" + ((t - time) / 1000f) + "\t" + ((duration) / 1000f) + "\t" + msg); } set = 0; break; } } public static void cacheFileData(String path, Object data) { if (!isJS() || data == null) { return; } /** * @j2sNative * * swingjs.JSUtil.cacheFileData$S$O(path, data); * */ } public static void cacheFileData(File file) { byte[] data; if (!isJS() || (data = Platform.getFileBytes(file)) == null) { return; } cacheFileData(file.toString(), data); } public static byte[] getFileBytes(File f) { // TODO temporary doubling of 秘bytes and _bytes; // just remove _bytes when new transpiler has been installed return /** @j2sNative f && (f.秘bytes || f._bytes) || */ null; } public static byte[] getFileAsBytes(String fileStr) { byte[] bytes = null; // BH 2018 hack for no support for access-origin /** * @j2sNative bytes = swingjs.JSUtil.getFileAsBytes$O(fileStr) */ cacheFileData(fileStr, bytes); return bytes; } @SuppressWarnings("unused") public static String getFileAsString(String url) { String ret = null; /** * @j2sNative * * ret = swingjs.JSUtil.getFileAsString$S(url); * * */ cacheFileData(url, ret); return ret; } public static boolean setFileBytes(File f, String urlstring) { if (!isJS()) { return false; } @SuppressWarnings("unused") byte[] bytes = getFileAsBytes(urlstring); // TODO temporary doubling of 秘bytes and _bytes; // just remove _bytes when new transpiler has been installed /** * @j2sNative f.秘bytes = f._bytes = bytes; */ return true; } public static void addJ2SBinaryType(String ext) { /** * @j2sNative * * J2S._binaryTypes.push("." + ext + "?"); * */ } /** * Encode the URI using JavaScript encodeURIComponent * * @param value * @return encoded value */ public static String encodeURI(String value) { /** * @j2sNative value = encodeURIComponent(value); */ return value; } /** * Open the URL using a simple window call if this is JavaScript * * @param url * @return true if window has been opened */ public static boolean openURL(String url) throws IOException { if (!isJS()) { BrowserLauncher.openURL(url); return false; } /** * @j2sNative * * * window.open(url); */ return true; } public static String getUniqueAppletID() { @SuppressWarnings("unused") ThreadGroup g = Thread.currentThread().getThreadGroup(); /** * @j2sNative return g.秘html5Applet._uniqueId; * */ return null; } /** * Read the Info block for this applet. * * @param prefix * "jalview_" * @param p * @return unique id for this applet */ public static void readInfoProperties(String prefix, Properties p) { if (!isJS()) { return; } @SuppressWarnings("unused") ThreadGroup g = Thread.currentThread().getThreadGroup(); String id = getUniqueAppletID(); String key = "", value = ""; /** * @j2sNative var info = g.秘html5Applet.__Info || {}; for (var key in info) * { if (key.indexOf(prefix) == 0) { value = "" + info[key]; */ System.out.println( "Platform id=" + id + " reading Info." + key + " = " + value); p.put(key, value); /** * @j2sNative * * * } } */ } public static void setAjaxJSON(URL url) { if (isJS()) { JSON.setAjax(url); } } public static Object parseJSON(InputStream response) throws IOException, ParseException { if (isJS()) { return JSON.parse(response); } BufferedReader br = null; try { br = new BufferedReader(new InputStreamReader(response, "UTF-8")); return new JSONParser().parse(br); } finally { if (br != null) { try { br.close(); } catch (IOException e) { // ignore } } } } public static Object parseJSON(String json) throws ParseException { return (isJS() ? JSON.parse(json) : new JSONParser().parse(json)); } public static Object parseJSON(Reader r) throws IOException, ParseException { if (r == null) { return null; } if (!isJS()) { return new JSONParser().parse(r); } // Using a file reader is not currently supported in SwingJS JavaScript if (r instanceof FileReader) { throw new IOException( "StringJS does not support FileReader parsing for JSON -- but it could..."); } return JSON.parse(r); } /** * Dump the input stream to an output file. * * @param is * @param outFile * @throws IOException * if the file cannot be created or there is a problem reading the * input stream. */ public static void streamToFile(InputStream is, File outFile) throws IOException { FileOutputStream fio = new FileOutputStream(outFile); try { if (isJS() && /** * @j2sNative outFile.setBytes$O && outFile.setBytes$O(is) && */ true) { return; } byte[] bb = new byte[32 * 1024]; int l; while ((l = is.read(bb)) > 0) { fio.write(bb, 0, l); } } finally { fio.close(); } } /** * Add a known domain that implements access-control-allow-origin:* * * These should be reviewed periodically. * * @param domain * for a service that is not allowing ajax * * @author hansonr@stolaf.edu * */ public static void addJ2SDirectDatabaseCall(String domain) { if (isJS()) { System.out.println( "Platform adding known access-control-allow-origin * for domain " + domain); /** * @j2sNative * * J2S.addDirectDatabaseCall(domain); */ } } public static void getURLCommandArguments() { /** * Retrieve the first query field as command arguments to Jalview. Include * only if prior to "?j2s" or "&j2s" or "#". Assign the applet's __Info.args * element to this value. * * @j2sNative var a = * decodeURI((document.location.href.replace("&","?").split("?j2s")[0] * + "?").split("?")[1].split("#")[0]); a && * (J2S.thisApplet.__Info.args = a.split(" ")); */ } public static URL getDocumentBase() { try { if (isJS()) { @SuppressWarnings("unused") Object g = Thread.currentThread().getThreadGroup(); return new URL(/** * @j2sNative g.秘html5Applet._appletPanel.appletDocumentBase * || */ ""); } } catch (MalformedURLException e) { } return null; } public static URL getCodeBase() { try { if (isJS()) { @SuppressWarnings("unused") Object g = Thread.currentThread().getThreadGroup(); return new URL(/** * @j2sNative g.秘html5Applet._appletPanel.appletCodeBase * || */ ""); } } catch (MalformedURLException e) { } return null; } /** * load a resource -- probably a core file -- if and only if a particular * class has not been instantialized. We use a String here because if we used * a .class object, that reference itself would simply load the class, and we * want the core package to include that as well. * * @param resourcePath * @param className */ public static void loadStaticResource(Object resourcePath, String className) { /** * * @j2sNative if (!swingjs.JSUtil.isClassLoaded$S(className)) * swingjs.JSUtil.loadStaticResource$S(resourcePath); */ } public static void ensureRegex() { loadStaticResource("core/core_stevesoft.z.js", "com.stevesoft.pat.Regex"); } public static Regex newRegex(String searchString, String replaceString) { ensureRegex(); return (replaceString == null ? new Regex(searchString) : new Regex(searchString, replaceString)); } public static Regex newRegexPerl(String code) { ensureRegex(); return Regex.perlCode(code); } /** * @param c */ public static Color getColorFromName(String name) { if (name == null) { return null; } /** * @j2sNative * * return swingjs.JSUtil.getColorFromName$S(name); */ { // or make a static map; or use reflection on the field name switch (name.toLowerCase()) { case "black": return Color.black; case "blue": return Color.blue; case "cyan": return Color.cyan; case "darkgray": return Color.darkGray; case "gray": return Color.gray; case "green": return Color.green; case "lightgray": return Color.lightGray; case "magenta": return Color.magenta; case "orange": return Color.orange; case "pink": return Color.pink; case "red": return Color.red; case "white": return Color.white; case "yellow": return Color.yellow; default: return null; } } } }