// // This file was generated by the Eclipse Implementation of JAXB, v2.3.3 // See https://eclipse-ee4j.github.io/jaxb-ri // Any modifications to this file will be lost upon recompilation of the source schema. // Generated on: 2022.02.07 at 04:44:21 PM GMT // package jalview.xml.binding.uniprot; import java.util.ArrayList; import java.util.List; import javax.xml.bind.annotation.XmlAccessType; import javax.xml.bind.annotation.XmlAccessorType; import javax.xml.bind.annotation.XmlElement; import javax.xml.bind.annotation.XmlType; /** * Describes the names for the protein and parts thereof. * Equivalent to the flat file DE-line. * * <p>Java class for proteinType complex type. * * <p>The following schema fragment specifies the expected content contained within this class. * * <pre> * &lt;complexType name="proteinType"&gt; * &lt;complexContent&gt; * &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&gt; * &lt;sequence&gt; * &lt;group ref="{http://uniprot.org/uniprot}proteinNameGroup"/&gt; * &lt;element name="domain" maxOccurs="unbounded" minOccurs="0"&gt; * &lt;complexType&gt; * &lt;complexContent&gt; * &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&gt; * &lt;group ref="{http://uniprot.org/uniprot}proteinNameGroup"/&gt; * &lt;/restriction&gt; * &lt;/complexContent&gt; * &lt;/complexType&gt; * &lt;/element&gt; * &lt;element name="component" maxOccurs="unbounded" minOccurs="0"&gt; * &lt;complexType&gt; * &lt;complexContent&gt; * &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&gt; * &lt;group ref="{http://uniprot.org/uniprot}proteinNameGroup"/&gt; * &lt;/restriction&gt; * &lt;/complexContent&gt; * &lt;/complexType&gt; * &lt;/element&gt; * &lt;/sequence&gt; * &lt;/restriction&gt; * &lt;/complexContent&gt; * &lt;/complexType&gt; * </pre> * * */ @XmlAccessorType(XmlAccessType.FIELD) @XmlType(name = "proteinType", propOrder = { "recommendedName", "alternativeName", "submittedName", "allergenName", "biotechName", "cdAntigenName", "innName", "domain", "component" }) public class ProteinType { protected ProteinType.RecommendedName recommendedName; protected List alternativeName; protected List submittedName; protected EvidencedStringType allergenName; protected EvidencedStringType biotechName; protected List cdAntigenName; protected List innName; protected List domain; protected List component; /** * Gets the value of the recommendedName property. * * @return * possible object is * {@link ProteinType.RecommendedName } * */ public ProteinType.RecommendedName getRecommendedName() { return recommendedName; } /** * Sets the value of the recommendedName property. * * @param value * allowed object is * {@link ProteinType.RecommendedName } * */ public void setRecommendedName(ProteinType.RecommendedName value) { this.recommendedName = value; } /** * Gets the value of the alternativeName property. * * <p> * This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. * This is why there is not a <CODE>set</CODE> method for the alternativeName property. * * <p> * For example, to add a new item, do as follows: * <pre> * getAlternativeName().add(newItem); * </pre> * * * <p> * Objects of the following type(s) are allowed in the list * {@link ProteinType.AlternativeName } * * */ public List getAlternativeName() { if (alternativeName == null) { alternativeName = new ArrayList(); } return this.alternativeName; } /** * Gets the value of the submittedName property. * * <p> * This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. * This is why there is not a <CODE>set</CODE> method for the submittedName property. * * <p> * For example, to add a new item, do as follows: * <pre> * getSubmittedName().add(newItem); * </pre> * * * <p> * Objects of the following type(s) are allowed in the list * {@link ProteinType.SubmittedName } * * */ public List getSubmittedName() { if (submittedName == null) { submittedName = new ArrayList(); } return this.submittedName; } /** * Gets the value of the allergenName property. * * @return * possible object is * {@link EvidencedStringType } * */ public EvidencedStringType getAllergenName() { return allergenName; } /** * Sets the value of the allergenName property. * * @param value * allowed object is * {@link EvidencedStringType } * */ public void setAllergenName(EvidencedStringType value) { this.allergenName = value; } /** * Gets the value of the biotechName property. * * @return * possible object is * {@link EvidencedStringType } * */ public EvidencedStringType getBiotechName() { return biotechName; } /** * Sets the value of the biotechName property. * * @param value * allowed object is * {@link EvidencedStringType } * */ public void setBiotechName(EvidencedStringType value) { this.biotechName = value; } /** * Gets the value of the cdAntigenName property. * * <p> * This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. * This is why there is not a <CODE>set</CODE> method for the cdAntigenName property. * * <p> * For example, to add a new item, do as follows: * <pre> * getCdAntigenName().add(newItem); * </pre> * * * <p> * Objects of the following type(s) are allowed in the list * {@link EvidencedStringType } * * */ public List getCdAntigenName() { if (cdAntigenName == null) { cdAntigenName = new ArrayList(); } return this.cdAntigenName; } /** * Gets the value of the innName property. * * <p> * This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. * This is why there is not a <CODE>set</CODE> method for the innName property. * * <p> * For example, to add a new item, do as follows: * <pre> * getInnName().add(newItem); * </pre> * * * <p> * Objects of the following type(s) are allowed in the list * {@link EvidencedStringType } * * */ public List getInnName() { if (innName == null) { innName = new ArrayList(); } return this.innName; } /** * Gets the value of the domain property. * * <p> * This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. * This is why there is not a <CODE>set</CODE> method for the domain property. * * <p> * For example, to add a new item, do as follows: * <pre> * getDomain().add(newItem); * </pre> * * * <p> * Objects of the following type(s) are allowed in the list * {@link ProteinType.Domain } * * */ public List getDomain() { if (domain == null) { domain = new ArrayList(); } return this.domain; } /** * Gets the value of the component property. * * <p> * This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. * This is why there is not a <CODE>set</CODE> method for the component property. * * <p> * For example, to add a new item, do as follows: * <pre> * getComponent().add(newItem); * </pre> * * * <p> * Objects of the following type(s) are allowed in the list * {@link ProteinType.Component } * * */ public List getComponent() { if (component == null) { component = new ArrayList(); } return this.component; } /** * <p>Java class for anonymous complex type. * * <p>The following schema fragment specifies the expected content contained within this class. * * <pre> * &lt;complexType&gt; * &lt;complexContent&gt; * &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&gt; * &lt;sequence&gt; * &lt;element name="fullName" type="{http://uniprot.org/uniprot}evidencedStringType" minOccurs="0"/&gt; * &lt;element name="shortName" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded" minOccurs="0"/&gt; * &lt;element name="ecNumber" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded" minOccurs="0"/&gt; * &lt;/sequence&gt; * &lt;/restriction&gt; * &lt;/complexContent&gt; * &lt;/complexType&gt; * </pre> * * */ @XmlAccessorType(XmlAccessType.FIELD) @XmlType(name = "", propOrder = { "fullName", "shortName", "ecNumber" }) public static class AlternativeName { protected EvidencedStringType fullName; protected List shortName; protected List ecNumber; /** * Gets the value of the fullName property. * * @return * possible object is * {@link EvidencedStringType } * */ public EvidencedStringType getFullName() { return fullName; } /** * Sets the value of the fullName property. * * @param value * allowed object is * {@link EvidencedStringType } * */ public void setFullName(EvidencedStringType value) { this.fullName = value; } /** * Gets the value of the shortName property. * * <p> * This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. * This is why there is not a <CODE>set</CODE> method for the shortName property. * * <p> * For example, to add a new item, do as follows: * <pre> * getShortName().add(newItem); * </pre> * * * <p> * Objects of the following type(s) are allowed in the list * {@link EvidencedStringType } * * */ public List getShortName() { if (shortName == null) { shortName = new ArrayList(); } return this.shortName; } /** * Gets the value of the ecNumber property. * * <p> * This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. * This is why there is not a <CODE>set</CODE> method for the ecNumber property. * * <p> * For example, to add a new item, do as follows: * <pre> * getEcNumber().add(newItem); * </pre> * * * <p> * Objects of the following type(s) are allowed in the list * {@link EvidencedStringType } * * */ public List getEcNumber() { if (ecNumber == null) { ecNumber = new ArrayList(); } return this.ecNumber; } } /** * <p>Java class for anonymous complex type. * * <p>The following schema fragment specifies the expected content contained within this class. * * <pre> * &lt;complexType&gt; * &lt;complexContent&gt; * &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&gt; * &lt;group ref="{http://uniprot.org/uniprot}proteinNameGroup"/&gt; * &lt;/restriction&gt; * &lt;/complexContent&gt; * &lt;/complexType&gt; * </pre> * * */ @XmlAccessorType(XmlAccessType.FIELD) @XmlType(name = "", propOrder = { "recommendedName", "alternativeName", "submittedName", "allergenName", "biotechName", "cdAntigenName", "innName" }) public static class Component { protected ProteinType.RecommendedName recommendedName; protected List alternativeName; protected List submittedName; protected EvidencedStringType allergenName; protected EvidencedStringType biotechName; protected List cdAntigenName; protected List innName; /** * Gets the value of the recommendedName property. * * @return * possible object is * {@link ProteinType.RecommendedName } * */ public ProteinType.RecommendedName getRecommendedName() { return recommendedName; } /** * Sets the value of the recommendedName property. * * @param value * allowed object is * {@link ProteinType.RecommendedName } * */ public void setRecommendedName(ProteinType.RecommendedName value) { this.recommendedName = value; } /** * Gets the value of the alternativeName property. * * <p> * This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. * This is why there is not a <CODE>set</CODE> method for the alternativeName property. * * <p> * For example, to add a new item, do as follows: * <pre> * getAlternativeName().add(newItem); * </pre> * * * <p> * Objects of the following type(s) are allowed in the list * {@link ProteinType.AlternativeName } * * */ public List getAlternativeName() { if (alternativeName == null) { alternativeName = new ArrayList(); } return this.alternativeName; } /** * Gets the value of the submittedName property. * * <p> * This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. * This is why there is not a <CODE>set</CODE> method for the submittedName property. * * <p> * For example, to add a new item, do as follows: * <pre> * getSubmittedName().add(newItem); * </pre> * * * <p> * Objects of the following type(s) are allowed in the list * {@link ProteinType.SubmittedName } * * */ public List getSubmittedName() { if (submittedName == null) { submittedName = new ArrayList(); } return this.submittedName; } /** * Gets the value of the allergenName property. * * @return * possible object is * {@link EvidencedStringType } * */ public EvidencedStringType getAllergenName() { return allergenName; } /** * Sets the value of the allergenName property. * * @param value * allowed object is * {@link EvidencedStringType } * */ public void setAllergenName(EvidencedStringType value) { this.allergenName = value; } /** * Gets the value of the biotechName property. * * @return * possible object is * {@link EvidencedStringType } * */ public EvidencedStringType getBiotechName() { return biotechName; } /** * Sets the value of the biotechName property. * * @param value * allowed object is * {@link EvidencedStringType } * */ public void setBiotechName(EvidencedStringType value) { this.biotechName = value; } /** * Gets the value of the cdAntigenName property. * * <p> * This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. * This is why there is not a <CODE>set</CODE> method for the cdAntigenName property. * * <p> * For example, to add a new item, do as follows: * <pre> * getCdAntigenName().add(newItem); * </pre> * * * <p> * Objects of the following type(s) are allowed in the list * {@link EvidencedStringType } * * */ public List getCdAntigenName() { if (cdAntigenName == null) { cdAntigenName = new ArrayList(); } return this.cdAntigenName; } /** * Gets the value of the innName property. * * <p> * This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. * This is why there is not a <CODE>set</CODE> method for the innName property. * * <p> * For example, to add a new item, do as follows: * <pre> * getInnName().add(newItem); * </pre> * * * <p> * Objects of the following type(s) are allowed in the list * {@link EvidencedStringType } * * */ public List getInnName() { if (innName == null) { innName = new ArrayList(); } return this.innName; } } /** * <p>Java class for anonymous complex type. * * <p>The following schema fragment specifies the expected content contained within this class. * * <pre> * &lt;complexType&gt; * &lt;complexContent&gt; * &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&gt; * &lt;group ref="{http://uniprot.org/uniprot}proteinNameGroup"/&gt; * &lt;/restriction&gt; * &lt;/complexContent&gt; * &lt;/complexType&gt; * </pre> * * */ @XmlAccessorType(XmlAccessType.FIELD) @XmlType(name = "", propOrder = { "recommendedName", "alternativeName", "submittedName", "allergenName", "biotechName", "cdAntigenName", "innName" }) public static class Domain { protected ProteinType.RecommendedName recommendedName; protected List alternativeName; protected List submittedName; protected EvidencedStringType allergenName; protected EvidencedStringType biotechName; protected List cdAntigenName; protected List innName; /** * Gets the value of the recommendedName property. * * @return * possible object is * {@link ProteinType.RecommendedName } * */ public ProteinType.RecommendedName getRecommendedName() { return recommendedName; } /** * Sets the value of the recommendedName property. * * @param value * allowed object is * {@link ProteinType.RecommendedName } * */ public void setRecommendedName(ProteinType.RecommendedName value) { this.recommendedName = value; } /** * Gets the value of the alternativeName property. * * <p> * This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. * This is why there is not a <CODE>set</CODE> method for the alternativeName property. * * <p> * For example, to add a new item, do as follows: * <pre> * getAlternativeName().add(newItem); * </pre> * * * <p> * Objects of the following type(s) are allowed in the list * {@link ProteinType.AlternativeName } * * */ public List getAlternativeName() { if (alternativeName == null) { alternativeName = new ArrayList(); } return this.alternativeName; } /** * Gets the value of the submittedName property. * * <p> * This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. * This is why there is not a <CODE>set</CODE> method for the submittedName property. * * <p> * For example, to add a new item, do as follows: * <pre> * getSubmittedName().add(newItem); * </pre> * * * <p> * Objects of the following type(s) are allowed in the list * {@link ProteinType.SubmittedName } * * */ public List getSubmittedName() { if (submittedName == null) { submittedName = new ArrayList(); } return this.submittedName; } /** * Gets the value of the allergenName property. * * @return * possible object is * {@link EvidencedStringType } * */ public EvidencedStringType getAllergenName() { return allergenName; } /** * Sets the value of the allergenName property. * * @param value * allowed object is * {@link EvidencedStringType } * */ public void setAllergenName(EvidencedStringType value) { this.allergenName = value; } /** * Gets the value of the biotechName property. * * @return * possible object is * {@link EvidencedStringType } * */ public EvidencedStringType getBiotechName() { return biotechName; } /** * Sets the value of the biotechName property. * * @param value * allowed object is * {@link EvidencedStringType } * */ public void setBiotechName(EvidencedStringType value) { this.biotechName = value; } /** * Gets the value of the cdAntigenName property. * * <p> * This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. * This is why there is not a <CODE>set</CODE> method for the cdAntigenName property. * * <p> * For example, to add a new item, do as follows: * <pre> * getCdAntigenName().add(newItem); * </pre> * * * <p> * Objects of the following type(s) are allowed in the list * {@link EvidencedStringType } * * */ public List getCdAntigenName() { if (cdAntigenName == null) { cdAntigenName = new ArrayList(); } return this.cdAntigenName; } /** * Gets the value of the innName property. * * <p> * This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. * This is why there is not a <CODE>set</CODE> method for the innName property. * * <p> * For example, to add a new item, do as follows: * <pre> * getInnName().add(newItem); * </pre> * * * <p> * Objects of the following type(s) are allowed in the list * {@link EvidencedStringType } * * */ public List getInnName() { if (innName == null) { innName = new ArrayList(); } return this.innName; } } /** * <p>Java class for anonymous complex type. * * <p>The following schema fragment specifies the expected content contained within this class. * * <pre> * &lt;complexType&gt; * &lt;complexContent&gt; * &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&gt; * &lt;sequence&gt; * &lt;element name="fullName" type="{http://uniprot.org/uniprot}evidencedStringType"/&gt; * &lt;element name="shortName" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded" minOccurs="0"/&gt; * &lt;element name="ecNumber" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded" minOccurs="0"/&gt; * &lt;/sequence&gt; * &lt;/restriction&gt; * &lt;/complexContent&gt; * &lt;/complexType&gt; * </pre> * * */ @XmlAccessorType(XmlAccessType.FIELD) @XmlType(name = "", propOrder = { "fullName", "shortName", "ecNumber" }) public static class RecommendedName { @XmlElement(required = true) protected EvidencedStringType fullName; protected List shortName; protected List ecNumber; /** * Gets the value of the fullName property. * * @return * possible object is * {@link EvidencedStringType } * */ public EvidencedStringType getFullName() { return fullName; } /** * Sets the value of the fullName property. * * @param value * allowed object is * {@link EvidencedStringType } * */ public void setFullName(EvidencedStringType value) { this.fullName = value; } /** * Gets the value of the shortName property. * * <p> * This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. * This is why there is not a <CODE>set</CODE> method for the shortName property. * * <p> * For example, to add a new item, do as follows: * <pre> * getShortName().add(newItem); * </pre> * * * <p> * Objects of the following type(s) are allowed in the list * {@link EvidencedStringType } * * */ public List getShortName() { if (shortName == null) { shortName = new ArrayList(); } return this.shortName; } /** * Gets the value of the ecNumber property. * * <p> * This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. * This is why there is not a <CODE>set</CODE> method for the ecNumber property. * * <p> * For example, to add a new item, do as follows: * <pre> * getEcNumber().add(newItem); * </pre> * * * <p> * Objects of the following type(s) are allowed in the list * {@link EvidencedStringType } * * */ public List getEcNumber() { if (ecNumber == null) { ecNumber = new ArrayList(); } return this.ecNumber; } } /** * <p>Java class for anonymous complex type. * * <p>The following schema fragment specifies the expected content contained within this class. * * <pre> * &lt;complexType&gt; * &lt;complexContent&gt; * &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&gt; * &lt;sequence&gt; * &lt;element name="fullName" type="{http://uniprot.org/uniprot}evidencedStringType"/&gt; * &lt;element name="ecNumber" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded" minOccurs="0"/&gt; * &lt;/sequence&gt; * &lt;/restriction&gt; * &lt;/complexContent&gt; * &lt;/complexType&gt; * </pre> * * */ @XmlAccessorType(XmlAccessType.FIELD) @XmlType(name = "", propOrder = { "fullName", "ecNumber" }) public static class SubmittedName { @XmlElement(required = true) protected EvidencedStringType fullName; protected List ecNumber; /** * Gets the value of the fullName property. * * @return * possible object is * {@link EvidencedStringType } * */ public EvidencedStringType getFullName() { return fullName; } /** * Sets the value of the fullName property. * * @param value * allowed object is * {@link EvidencedStringType } * */ public void setFullName(EvidencedStringType value) { this.fullName = value; } /** * Gets the value of the ecNumber property. * * <p> * This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. * This is why there is not a <CODE>set</CODE> method for the ecNumber property. * * <p> * For example, to add a new item, do as follows: * <pre> * getEcNumber().add(newItem); * </pre> * * * <p> * Objects of the following type(s) are allowed in the list * {@link EvidencedStringType } * * */ public List getEcNumber() { if (ecNumber == null) { ecNumber = new ArrayList(); } return this.ecNumber; } } }