>FER_CAPAA/1-97 Ferredoxin
>FER_CAPAN/1-144 Ferredoxin, chloroplast precursor
>FER1_SOLLC/1-144 Ferredoxin-1, chloroplast precursor
>Q93XJ9_SOLTU/1-144 Ferredoxin I precursor
>FER1_PEA/1-149 Ferredoxin-1, chloroplast precursor
>Q7XA98_TRIPR/1-152 Ferredoxin I
>FER1_MESCR/1-148 Ferredoxin-1, chloroplast precursor
>FER1_SPIOL/1-147 Ferredoxin-1, chloroplast precursor
>FER3_RAPSA/1-96 Ferredoxin, leaf L-A
>FER2_ARATH/1-148 Ferredoxin-2, chloroplast precursor
>FER_BRANA/1-96 Ferredoxin
>FER1_ARATH/1-148 Ferredoxin-1, chloroplast precursor
>Q93Z60_ARATH/1-118 At1g10960/T19D16_12
>FER1_MAIZE/1-150 Ferredoxin-1, chloroplast precursor
>O80429_MAIZE/1-140 Ferredoxin
* iteration 1
-MMMMMMM-M-MMMM
-AAAAAAA-A-AAAA
----TTAA-S-SSTA
----TTTT-T-TTVT
-------------L-
-------------G-
------TT-----S-
----PPAT-----P-
-SSSAAAT-A-AAR-
-VIILLLM-L-LLA-
-SSSYYSM-S-SSP-
-AGGGGGG-S-SSA-
-TTTTTA--A-AAF-
-MMMAAT--I-IIFA
-IIIVVMM-V-VVFL
-SSSSSSA-G-SSSS
-TTTTTTT-T-TTSM
-SSSSSAT-S-SSSS
-FFFFFFF-F-FFSI
-MLLLMAV-I-LLLL
-PPPRRPP-R-RRRR
-RRRTRKK-R-RRA-
-KKKQQ-P-S-QQA-
-PPPPP-Q-P-QQP-
-AAVMVTA-A-TTAA
-VVVPPPP-P-PPPP
-TTTMMPP-I-IITP
-SSSSSMM-S-SSAP
-LLLVVTM-L-LLVC
------AA-R-RR-F
-KKKTAAA-S-SS-S
-PAATTLL-L-LLAS
-IIITTPP-P-PPLP
-PSSKTTS-S-FFPL
-NNNATNN-A-AAAR
-VVVFTVT-N-NNAL
-GGGSKGG-T-TTKR
-EEENARR-Q-QQVV
-----F---------
-----P---------
-AAAGSAS-S-SSGA
-LLLFGLL-L-LLIV
-FFFLFFF-F-FFMA
-GGGGGGG-G-GGGK
-LLLLLLL-L-LLRP
-KKKKKKK-K-KKSL
-SSSTSST-S-SSAA
-----V---------
-AGGSSSG-G-SSSA
----LTAS-T-TTSP
----KKSR-A-AARM
-NRRRRR--R-RRRR
-GNNGG---G-GG-R
-GGGDDGG-G-GG-Q
-KRRLLRG-R-RRRL
-VIIAAVR-V-VVLL
-TTTVVTM-T-TTRR
-CCCAAAT-A-AAAA
-MMMMMMM-M-MMQQ
AAAAAAAAAAAAAAA
SSSSSTAATTTTTTT
YYYYYYYYYYYYYYY
KKKKKKKKKKKKKNN
VVVVVVVVVVVVVVV
KKKKKKTTKKKKKKK
LLLLLLLLFFFFFLL
IIIIVIVVIIIIIII
TTTTTTTTTTTTTTT
PPPPPPPPPPPPPPP
DDEDDEETEEEEEEE
GGGGGGGGGGGGGGG
PPPPTPKNEEEEEEE
IIIIQQQVQLQQQVV
EEEEEEEEEEEEEEE
FFFFFFLFVVVVVLL
DDEEEDEQEEEEEQQ
CCCCCCCCCCCCCVV
PPPPPPPPDDDEEPP
DDDDSDDDDDDEEDD
DNDDDDDDDDDDDDD
VVVVVVVVVVVVVVV
YYYYYYYYYYYYYYY
IIIIIIIIVVVVVII
LLLLLLLLLLLLLLL
DDDDDDDDDDDDDDD
QQQQHHAAAAAAAQF
AAAAAAAAAAAAAAA
EEEEEEEEEEEEEEE
EEEEEEEEEEEEEEE
AAEEVVAEAAAAADE
GGGGGGGGGGGGGGG
HHHHIIIIIIILLII
DDDDDEDDDDDDDDD
LLLLLLLLLLLLLLL
PPPPPPPPPPPPPPP
YYYYYYYYYYYYYYF
SSSSSSSSSSSSSSS
CCCCCCCCCCCCCCC
RRRRRRRRRRRRRRR
AAAAAAAAAAAAAAA
GGGGGGGGGGGGGGG
SSSSSSSSSSSSSSS
CCCCCCCCCCCCCCC
SSSSSSSSSSSSSSS
SSSSSSSSSSSSSSS
CCCCCCCCCCCCCCC
AAAAAAAAAAAAAAA
GGGGGGGGGGGGGGG
KKKKKKKKKKKKKKK
IIVVVVVLVVVVVVV
AATTVVTKVVVVVVV
GGAAGNSTSSSSSSS
GGGGGGGGGGGGGGG
AASTENSSSSFSSSS
VVVVVVVLVVVIIVV
DDDDDNNNDDDDDDD
QQQQQQQQQQQQQQQ
TTSSSEDDSSSSSSS
DDDDDDDDDDDDDDD
GGGGGGGQQQEQQQQ
NNNKSSSSSSSSSSS
FFFFFFFFFFFFFYF
LLLLLLLLLLLLLLL
DDDDDDDDDDDDDDN
DDEDDDDDDDDDDDD
DDDDEEDDDEDE-GN
QQQQQQQQQQQQ-QQ
LLEEIIIIIIIM-IV
EEAAEEKDAGAS-AA
EEAAAGEEEEEE-DD
GGGGGGGGGGGG-GG
WWFFFWWWFFFY-WW
VVVVVVVVVVVV-VV
LLLLLLLLLLLL-LL
TTTTTTTTTTTT-TT
CCCCCCCCCCCC-CC
VVVVVVVAAAAV-HA
AAAAAAAAAAAA-AA
YYYYYFYYYYYY-YY
PPPPPPPPPPPP-PP
QQKKTTTVTTTT-TT
SSGCSSGSSSSS-SS
DDDDDDDDDDDD-DD
VVVVVVVVVVVV-VV
TTTTVTTTTTTV-VV
IIIIIIIIIIII-II
EEEEEEEEEEEE-EE
TTTTTTTTTTTT-TT
HHHHHHHHHHHH-HH
KKKKKKKKRKKK-KK
EEEEEEEEEEEE-EE
AAEEEEEEEEEE-ED
EEEEDEEEDDEA-ED
LLLLLLLLMILI-LL
VVTTTTTTVVVM-TL
GGAAAAAA-----G-
-------------A-
*