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Packages that use Alignment | |
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compbio.data.sequence | A data model for multiple sequence alignment web services Classes in this package have no dependencies to other sources in the project. |
Uses of Alignment in compbio.data.sequence |
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Methods in compbio.data.sequence that return Alignment | |
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static Alignment |
ClustalAlignmentUtil.readClustalFile(java.io.File file)
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static Alignment |
ClustalAlignmentUtil.readClustalFile(java.io.InputStream instream)
Read Clustal formatted alignment. |
Methods in compbio.data.sequence with parameters of type Alignment | |
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static void |
ClustalAlignmentUtil.writeClustalAlignment(java.io.OutputStream outStream,
Alignment alignment)
Write Clustal formatted alignment Limitations: does not record the consensus. |
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