Package | Description |
---|---|
compbio.metadata |
A meta-data model for multiple sequence alignment web services
Classes in this package have no dependencies to other sources in the project.
|
compbio.runner |
Utilities commonly used by all runners.
|
Modifier and Type | Field and Description |
---|---|
(package private) java.util.List<Parameter<T>> |
RunnerConfig.parameters |
Modifier and Type | Method and Description |
---|---|
java.util.List<Parameter<T>> |
RunnerConfig.getParameters()
Returns the list of parameters supported executable of type T.
|
Modifier and Type | Method and Description |
---|---|
void |
RunnerConfig.addParameter(Parameter<T> param)
Adds parameter to the internal parameter list
|
Modifier and Type | Method and Description |
---|---|
void |
RunnerConfig.setParameters(java.util.List<Parameter<T>> parameters)
Sets the list of parameters as internal list
|
Modifier and Type | Method and Description |
---|---|
java.util.Map<Parameter<?>,java.lang.String> |
OptionCombinator.getAllConstrainedParametersWithBorderValues(boolean minValue) |
java.util.Map<Parameter<?>,java.lang.String> |
OptionCombinator.getAllConstrainedParametersWithRandomValues() |
java.util.List<Parameter<?>> |
OptionCombinator.getAllParameters() |
Modifier and Type | Method and Description |
---|---|
(package private) java.lang.String |
OptionCombinator.getLowBorderValue(Parameter<?> param) |
(package private) java.lang.String |
OptionCombinator.getRandomValue(Parameter<?> param) |
(package private) java.lang.String |
OptionCombinator.getUpperBorderValue(Parameter<?> param) |
(package private) static java.lang.String |
OptionCombinator.getValue(Parameter<?> param) |
Modifier and Type | Method and Description |
---|---|
java.util.List<java.lang.String> |
OptionCombinator.parametersToCommandString(java.util.List<Parameter<?>> orderedList,
java.util.Map<Parameter<?>,java.lang.String> prmValue) |
java.util.List<java.lang.String> |
OptionCombinator.parametersToCommandString(java.util.List<Parameter<?>> orderedList,
java.util.Map<Parameter<?>,java.lang.String> prmValue) |