JABAWS
2.2
Contents:
Getting Started
Included Tools
Multiple Sequence Alignment
Protein Disorder Prediction
Amino Acid Conservation
RNA Secondary Structure
Command Line Client (CLI)
Web Application Archive (WAR)
Virtual Appliance (VA)
Advanced Usage
For Developers
Usage Statistics
Citations
Changelog
JABAWS
Docs
»
Included Tools
Return to the JABAWS homepage
Included Tools
¶
Multiple Sequence Alignment
¶
Clustal Omega
(version 1.2.4)
ClustalW
(version 2.1)
Mafft
(version 7.310)
Muscle
(version 3.8.31)
T-coffee
(version 11.00.8cbe486)
Probcons
(version 1.12)
MSAProbs
(version 0.9.7)
GLProbs
(version 0.9.7)
Protein Disorder Prediction
¶
DisEMBL
(version 1.5)
IUPred
(version 1.0)
Jronn - Java implementation of
Ronn
(version 3.1)
GlobPlot
(version 2.3)
Amino Acid Conservation
¶
AACon
(version 1.1)
RNA Secondary Structure
¶
RNAalifold from
ViennaRNA
(version 2.0)