compbio.pipeline._jpred
Class BlastParser

java.lang.Object
  compbio.pipeline._jpred.BlastParser

public class BlastParser
extends Object

Constructor Summary

BlastParser(String file)

Method Summary

static void

main(String[] args) args[0] is assumed to be the name of a Blast output file

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

BlastParser

public BlastParser(String file)
            throws FileNotFoundException,
                   XMLStreamException

Throws:

FileNotFoundException

XMLStreamException

Method Detail

main

public static void main(String[] args)
                 throws FileNotFoundException,
                        XMLStreamException

args[0] is assumed to be the name of a Blast output file

Throws:

XMLStreamException

FileNotFoundException