| Group name | Methods |
| cluster | compbio.runner.disorder.DisemblTester.testRunOnClusterAsync() compbio.runner.msa.TcoffeeTester.testPersistance() compbio.runner.conservation.AAConTester.testRunOnClusterAsync() compbio.runner.msa.ProbconsTester.testClusterExecute() compbio.runner.disorder.GlobPlotTester.testRunOnClusterAsync() compbio.runner.msa.ClustalWTester.readStatisticsClusterExecution() compbio.runner.disorder.IUPredTester.testRunOnCluster() compbio.runner.disorder.JronnTester.testRunOnCluster() compbio.runner.msa.ClustalWTester.testRunOnCluster() compbio.runner.disorder.GlobPlotTester.testRunOnCluster() compbio.engine.cluster.drmaa.ClusterSessionTester.testTaskList() compbio.runner.msa.MuscleTester.testRunOnCluster() compbio.runner.disorder.IUPredTester.testRunOnClusterAsync() compbio.runner.msa.MafftTester.testRunOnClusterAsyncCheckStatusLongPoolingTime() compbio.engine.cluster.drmaa.DrmaaAsyncClusterEngineTester.testGetJobStatus() compbio.engine.cluster.drmaa.DrmaaClusterEngineTester.testCancel() compbio.engine.cluster.drmaa.DrmaaAsyncClusterEngineTester.testCancel() compbio.runner.msa.MafftTester.testClusterExecute() compbio.runner.disorder.DisemblTester.testRunOnCluster() compbio.engine.cluster.drmaa.DrmaaClusterEngineTester.testSubmit() compbio.engine.cluster.drmaa.DrmaaAsyncClusterEngineTester.testSubmit() compbio.engine.conf.PropertyHelperManagerTester.testClusterEngineConf() compbio.runner.msa.TcoffeeTester.testClusterExecute() compbio.runner.disorder.JronnTester.testRunOnClusterAsync() |
| engine | compbio.engine.local.AsyncLocalRunnerTester.testGetStatus() compbio.engine.local.LocalRunnerTester.testCancelLocally() compbio.engine.local.AsyncLocalRunnerTester.testCancelLocally() compbio.engine.local.LocalRunnerTester.testMultipleCancelLocally() compbio.engine.local.AsyncLocalRunnerTester.testMultipleCancelLocally() compbio.engine.FilePullerTester.testCache() compbio.engine.local.AsyncLocalRunnerTester.testAsyncCancelOperation() compbio.engine.local.AsyncLocalRunnerTester.testAsyncRetrievOperation() compbio.engine.local.AsyncLocalRunnerTester.testSubmitLocally() compbio.engine.cluster.drmaa.ClusterSessionTester.testTaskList() compbio.engine.cluster.drmaa.DrmaaAsyncClusterEngineTester.testGetJobStatus() compbio.engine.local.LocalRunnerTester.testCancelCompletedTaskLocally() compbio.engine.local.AsyncLocalRunnerTester.testCancelCompletedTaskLocally() compbio.engine.cluster.drmaa.DrmaaClusterEngineTester.testCancel() compbio.engine.cluster.drmaa.DrmaaAsyncClusterEngineTester.testCancel() compbio.engine.FilePullerTester.testGetDelay() compbio.engine.cluster.drmaa.DrmaaClusterEngineTester.testSubmit() compbio.engine.cluster.drmaa.DrmaaAsyncClusterEngineTester.testSubmit() compbio.engine.FilePullerTester.testPull() |
| non_windows | compbio.runner.msa.MafftTester.readStatistics() compbio.runner.msa.MafftParametersTester.testParameters() compbio.runner.msa.MafftParametersTester.testDefaultParameters() compbio.runner.msa.TcoffeeTester.testExecute() compbio.runner.msa.MafftParametersTester.testPresets() compbio.runner.msa.MafftTester.testSetInputTester() compbio.runner.msa.ProbconsParametersTester.testArguments() compbio.runner.msa.TcoffeeTester.readStatistics() compbio.runner.msa.MafftParametersTester.testConstrainedParametersRandomValues() compbio.runner.msa.TcoffeeParametersTester.testConstrainedParametersMinValues() compbio.runner.msa.MafftTester.testExecute() compbio.runner.msa.ProbconsTester.readStatistics() compbio.runner.msa.TcoffeeParametersTester.testArguments() compbio.runner.msa.MafftTester.testRunOnClusterAsyncCheckStatusLongPoolingTime() compbio.runner.msa.TcoffeeTester.testNcore() compbio.runner.msa.MafftParametersTester.testOptions() compbio.runner.msa.ProbconsTester.testSetInputTester() compbio.runner.msa.MafftParametersTester.testConstrainedParametersMaxValues() compbio.runner.msa.ProbconsParametersTester.testConstrainedParametersMinValues() compbio.runner.msa.ProbconsTester.testExecute() compbio.runner.msa.TcoffeeParametersTester.testParameters() compbio.runner.msa.TcoffeeParametersTester.testDefaultParameters() compbio.runner.msa.TcoffeeTester.testPersistance() compbio.runner.msa.ProbconsParametersTester.testOptions() compbio.runner.msa.ProbconsTester.testClusterExecute() compbio.runner.msa.TcoffeeParametersTester.testPresets() compbio.runner.msa.TcoffeeParametersTester.testConstrainedParametersRandomValues() compbio.runner.msa.MafftTester.testPersistance() compbio.runner.msa.MafftParametersTester.testConstrainedParametersMinValues() compbio.runner.msa.ProbconsParametersTester.testConstrainedParametersMaxValues() compbio.runner.msa.MafftParametersTester.testArguments() compbio.runner.msa.TcoffeeParametersTester.testOptions() compbio.runner.msa.ProbconsParametersTester.testDefaultParameters() compbio.runner.msa.ProbconsParametersTester.testParameters() compbio.runner.msa.MafftTester.testClusterExecute() compbio.runner.msa.ProbconsTester.testPersistance() compbio.runner.msa.TcoffeeParametersTester.testConstrainedParametersMaxValues() compbio.runner.msa.ProbconsParametersTester.testConstrainedParametersRandomValues() compbio.runner.msa.TcoffeeTester.testClusterExecute() |
| runner | compbio.runner.conservation.AAConTester.testRunLocallyWithPreset() compbio.runner.disorder.DisemblTester.testRunOnClusterAsync() compbio.runner.msa.MafftParametersTester.testParameters() compbio.runner.conservation.AAConTester.testPersistance() compbio.runner.msa.MuscleParametersTester.testConstrainedParametersMinValues() compbio.runner.disorder.JronnTester.testRunLocally() compbio.runner.msa.ProbconsParametersTester.testArguments() compbio.runner.msa.TcoffeeParametersTester.testConstrainedParametersMinValues() compbio.runner.msa.MafftTester.testExecute() compbio.runner.msa.ClustalWParametersTester.testConstrainedParametersMinValues() compbio.runner.disorder.IUPredTester.testRunOnClusterAsync() compbio.runner.msa.ClustalWTester.testRunWithMatrix() compbio.runner.msa.ProbconsTester.testConfigurationLoading() compbio.runner.msa.TcoffeeParametersTester.testParameters() compbio.runner.disorder.JronnTester.testConfigurationLoading() compbio.runner.disorder.GlobPlotTester.testPersistance() compbio.runner.disorder.JronnTester.testRunOnCluster() compbio.runner.disorder.DisemblTester.readStatistics() compbio.runner.msa.MafftTester.testPersistance() compbio.runner.msa.MuscleParametersTester.testParameters() compbio.runner.msa.MafftParametersTester.testConstrainedParametersMinValues() compbio.runner.msa.ClustalWTester.testOptionsLocally() compbio.runner.msa.MafftTester.testClusterExecute() compbio.runner.msa.TcoffeeTester.testConfigurationLoading() compbio.runner.msa.ClustalWParametersTester.testParameters() compbio.runner.disorder.IUPredTester.testRunOnCluster() compbio.runner.msa.TcoffeeTester.readStatistics() compbio.runner.msa.MafftParametersTester.testConstrainedParametersRandomValues() compbio.runner.disorder.IUPredTester.testConfigurationLoading() compbio.runner.msa.ProbconsTester.readStatistics() compbio.runner.msa.MafftTester.testRunOnClusterAsyncCheckStatusLongPoolingTime() compbio.runner.msa.MafftParametersTester.testOptions() compbio.runner.disorder.JronnTester.readStatistics() compbio.runner.disorder.DisemblTester.testRunOnCluster() compbio.runner.msa.ProbconsTester.testSetInputTester() compbio.runner.msa.ClustalWTester.testPersistance() compbio.runner.disorder.DisemblTester.testConfigurationLoading() compbio.runner.msa.MuscleParametersTester.testConstrainedParametersRandomValues() compbio.runner.msa.ClustalWTester.readStatisticsClusterExecution() compbio.runner.msa.MuscleTester.testPersistance() compbio.runner.disorder.IUPredTester.testRunLocally() compbio.runner.msa.TcoffeeParametersTester.testConstrainedParametersRandomValues() compbio.runner.msa.ClustalWParametersTester.testOptions() compbio.runner.msa.ProbconsParametersTester.testConstrainedParametersMaxValues() compbio.runner.msa.TcoffeeParametersTester.testOptions() compbio.runner.disorder.JronnTester.testRunLocallyOnTwoCpu() compbio.runner.msa.ProbconsParametersTester.testDefaultParameters() compbio.runner.msa.ClustalWParametersTester.testConstrainedParametersRandomValues() compbio.runner.disorder.IUPredTester.testRunLocallyWithParams() compbio.runner.disorder.DisemblTester.testRunLocally() compbio.runner.msa.MuscleParametersTester.testOptions() compbio.runner.disorder.JronnTester.testRunOnClusterAsync() compbio.runner.msa.ClustalWTester.testConfigurationLoading() compbio.runner.disorder.DisemblTester.testPersistance() compbio.runner.msa.MafftTester.readStatistics() compbio.runner.msa.MafftParametersTester.testDefaultParameters() compbio.runner.conservation.AAConTester.testRunOnClusterAsync() compbio.runner.msa.MafftTester.testSetInputTester() compbio.runner.conservation.AAConTester.testRunLocallyOnTwoCpu() compbio.runner.msa.ClustalWTester.testRunOnCluster() compbio.runner.disorder.GlobPlotTester.readStatistics() compbio.runner.disorder.IUPredTester.testPersistance() compbio.runner.msa.TcoffeeTester.testNcore() compbio.runner.msa.MafftParametersTester.testConstrainedParametersMaxValues() compbio.runner.msa.MuscleTester.testRunLocally() compbio.runner.msa.TcoffeeParametersTester.testDefaultParameters() compbio.runner.msa.ClustalWTester.testRunLocally() compbio.runner.msa.ProbconsParametersTester.testOptions() compbio.runner.disorder.GlobPlotTester.testRunOnClusterAsync() compbio.runner.msa.ClustalWParametersTester.testConstrainedParametersMaxValues() compbio.runner.msa.MuscleParametersTester.testDefaultParameters() compbio.runner.conservation.AAConTester.readStatistics() compbio.runner.msa.MuscleParametersTester.testConstrainedParametersMaxValues() compbio.runner.msa.MuscleTester.testRunOnCluster() compbio.runner.msa.TcoffeeParametersTester.testConstrainedParametersMaxValues() compbio.runner.msa.ProbconsParametersTester.testConstrainedParametersRandomValues() compbio.runner.msa.ClustalWParametersTester.testDefaultParameters() compbio.runner.msa.MuscleTester.testConfigurationLoading() compbio.runner.disorder.IUPredTester.testReadResults() compbio.runner.msa.MafftParametersTester.testPresets() compbio.runner.msa.TcoffeeTester.testExecute() compbio.runner.msa.MuscleTester.readStatistics() compbio.runner.msa.ClustalWParametersTester.testArguments() compbio.runner.msa.TcoffeeParametersTester.testArguments() compbio.runner.conservation.AAConTester.testRunOnCluster() compbio.runner.msa.MuscleParametersTester.testArguments() compbio.runner.msa.ProbconsParametersTester.testConstrainedParametersMinValues() compbio.runner.msa.ProbconsTester.testExecute() compbio.runner.disorder.GlobPlotTester.testRunLocally() compbio.runner.conservation.AAConTester.testConfigurationLoading() compbio.runner.msa.TcoffeeTester.testPersistance() compbio.runner.msa.ProbconsTester.testClusterExecute() compbio.runner.msa.TcoffeeParametersTester.testPresets() compbio.runner.msa.MuscleParametersTester.testPresets() compbio.runner.disorder.IUPredTester.testSetParameter() compbio.runner.msa.MafftParametersTester.testArguments() compbio.runner.disorder.GlobPlotTester.testRunOnCluster() compbio.runner.msa.MafftTester.testConfigurationLoading() compbio.runner.msa.ClustalWTester.readStatistics() compbio.runner.msa.ProbconsParametersTester.testParameters() compbio.runner.msa.ProbconsTester.testPersistance() compbio.runner.msa.ClustalWParametersTester.testPresets() compbio.runner.disorder.GlobPlotTester.testConfigurationLoading() compbio.runner.conservation.AAConTester.testRunLocally() compbio.runner.msa.TcoffeeTester.testClusterExecute() compbio.runner.disorder.JronnTester.testPersistance() |