compbio.runner.clustal.ClustalWParametersTester

Tests passed/Failed/Skipped:0/8/0
Started on:Mon Dec 21 18:09:47 GMT 2009
Total time:2 seconds (2219 ms)
Included groups:
Excluded groups:

(Hover the method name to see the test class name)

FAILED TESTS
Test method Time (seconds) Exception
testArguments 0
java.lang.IllegalArgumentException: Working directory: /homes/pvtroshin/workspace/clustengine/testoutput/local\ClustalW#42979987799825706 is inaccessible or does not exist!
	at compbio.engine.PathValidator.validateDirectory(PathValidator.java:73)
	at compbio.engine.local.ExecutableWrapper.<init>(ExecutableWrapper.java:57)
	at compbio.engine.local.LocalRunner.executeJob(LocalRunner.java:69)
	at compbio.runner.clustal.ClustalWParametersTester.singleTest(ClustalWParametersTester.java:202)
	at compbio.runner.clustal.ClustalWParametersTester.test(ClustalWParametersTester.java:183)
	at compbio.runner.clustal.ClustalWParametersTester.testArguments(ClustalWParametersTester.java:137)
... Removed 22 stack frames
Click to show all stack frames
java.lang.IllegalArgumentException: Working directory: /homes/pvtroshin/workspace/clustengine/testoutput/local\ClustalW#42979987799825706 is inaccessible or does not exist!
	at compbio.engine.PathValidator.validateDirectory(PathValidator.java:73)
	at compbio.engine.local.ExecutableWrapper.<init>(ExecutableWrapper.java:57)
	at compbio.engine.local.LocalRunner.executeJob(LocalRunner.java:69)
	at compbio.runner.clustal.ClustalWParametersTester.singleTest(ClustalWParametersTester.java:202)
	at compbio.runner.clustal.ClustalWParametersTester.test(ClustalWParametersTester.java:183)
	at compbio.runner.clustal.ClustalWParametersTester.testArguments(ClustalWParametersTester.java:137)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
	at java.lang.reflect.Method.invoke(Method.java:597)
	at org.testng.internal.MethodHelper.invokeMethod(MethodHelper.java:607)
	at org.testng.internal.Invoker.invokeMethod(Invoker.java:517)
	at org.testng.internal.Invoker.invokeTestMethod(Invoker.java:669)
	at org.testng.internal.Invoker.invokeTestMethods(Invoker.java:956)
	at org.testng.internal.TestMethodWorker.invokeTestMethods(TestMethodWorker.java:126)
	at org.testng.internal.TestMethodWorker.run(TestMethodWorker.java:110)
	at org.testng.TestRunner.runWorkers(TestRunner.java:759)
	at org.testng.TestRunner.privateRun(TestRunner.java:592)
	at org.testng.TestRunner.run(TestRunner.java:486)
	at org.testng.SuiteRunner.runTest(SuiteRunner.java:332)
	at org.testng.SuiteRunner.runSequentially(SuiteRunner.java:327)
	at org.testng.SuiteRunner.privateRun(SuiteRunner.java:299)
	at org.testng.SuiteRunner.run(SuiteRunner.java:204)
	at org.testng.TestNG.createAndRunSuiteRunners(TestNG.java:877)
	at org.testng.TestNG.runSuitesLocally(TestNG.java:842)
	at org.testng.TestNG.run(TestNG.java:751)
	at org.testng.remote.RemoteTestNG.run(RemoteTestNG.java:73)
	at org.testng.remote.RemoteTestNG.main(RemoteTestNG.java:124)
testConstrainedParametersMaxValues 0
java.lang.IllegalArgumentException: Working directory: /homes/pvtroshin/workspace/clustengine/testoutput/local\ClustalW#42979988961908025 is inaccessible or does not exist!
	at compbio.engine.PathValidator.validateDirectory(PathValidator.java:73)
	at compbio.engine.local.ExecutableWrapper.<init>(ExecutableWrapper.java:57)
	at compbio.engine.local.LocalRunner.executeJob(LocalRunner.java:69)
	at compbio.runner.clustal.ClustalWParametersTester.singleTest(ClustalWParametersTester.java:202)
	at compbio.runner.clustal.ClustalWParametersTester.test(ClustalWParametersTester.java:174)
	at compbio.runner.clustal.ClustalWParametersTester.testConstrainedParametersMaxValues(ClustalWParametersTester.java:151)
... Removed 22 stack frames
Click to show all stack frames
java.lang.IllegalArgumentException: Working directory: /homes/pvtroshin/workspace/clustengine/testoutput/local\ClustalW#42979988961908025 is inaccessible or does not exist!
	at compbio.engine.PathValidator.validateDirectory(PathValidator.java:73)
	at compbio.engine.local.ExecutableWrapper.<init>(ExecutableWrapper.java:57)
	at compbio.engine.local.LocalRunner.executeJob(LocalRunner.java:69)
	at compbio.runner.clustal.ClustalWParametersTester.singleTest(ClustalWParametersTester.java:202)
	at compbio.runner.clustal.ClustalWParametersTester.test(ClustalWParametersTester.java:174)
	at compbio.runner.clustal.ClustalWParametersTester.testConstrainedParametersMaxValues(ClustalWParametersTester.java:151)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
	at java.lang.reflect.Method.invoke(Method.java:597)
	at org.testng.internal.MethodHelper.invokeMethod(MethodHelper.java:607)
	at org.testng.internal.Invoker.invokeMethod(Invoker.java:517)
	at org.testng.internal.Invoker.invokeTestMethod(Invoker.java:669)
	at org.testng.internal.Invoker.invokeTestMethods(Invoker.java:956)
	at org.testng.internal.TestMethodWorker.invokeTestMethods(TestMethodWorker.java:126)
	at org.testng.internal.TestMethodWorker.run(TestMethodWorker.java:110)
	at org.testng.TestRunner.runWorkers(TestRunner.java:759)
	at org.testng.TestRunner.privateRun(TestRunner.java:592)
	at org.testng.TestRunner.run(TestRunner.java:486)
	at org.testng.SuiteRunner.runTest(SuiteRunner.java:332)
	at org.testng.SuiteRunner.runSequentially(SuiteRunner.java:327)
	at org.testng.SuiteRunner.privateRun(SuiteRunner.java:299)
	at org.testng.SuiteRunner.run(SuiteRunner.java:204)
	at org.testng.TestNG.createAndRunSuiteRunners(TestNG.java:877)
	at org.testng.TestNG.runSuitesLocally(TestNG.java:842)
	at org.testng.TestNG.run(TestNG.java:751)
	at org.testng.remote.RemoteTestNG.run(RemoteTestNG.java:73)
	at org.testng.remote.RemoteTestNG.main(RemoteTestNG.java:124)
testConstrainedParametersMinValues 0
java.lang.IllegalArgumentException: Working directory: /homes/pvtroshin/workspace/clustengine/testoutput/local\ClustalW#70979988327544395 is inaccessible or does not exist!
	at compbio.engine.PathValidator.validateDirectory(PathValidator.java:73)
	at compbio.engine.local.ExecutableWrapper.<init>(ExecutableWrapper.java:57)
	at compbio.engine.local.LocalRunner.executeJob(LocalRunner.java:69)
	at compbio.runner.clustal.ClustalWParametersTester.singleTest(ClustalWParametersTester.java:202)
	at compbio.runner.clustal.ClustalWParametersTester.test(ClustalWParametersTester.java:174)
	at compbio.runner.clustal.ClustalWParametersTester.testConstrainedParametersMinValues(ClustalWParametersTester.java:144)
... Removed 22 stack frames
Click to show all stack frames
java.lang.IllegalArgumentException: Working directory: /homes/pvtroshin/workspace/clustengine/testoutput/local\ClustalW#70979988327544395 is inaccessible or does not exist!
	at compbio.engine.PathValidator.validateDirectory(PathValidator.java:73)
	at compbio.engine.local.ExecutableWrapper.<init>(ExecutableWrapper.java:57)
	at compbio.engine.local.LocalRunner.executeJob(LocalRunner.java:69)
	at compbio.runner.clustal.ClustalWParametersTester.singleTest(ClustalWParametersTester.java:202)
	at compbio.runner.clustal.ClustalWParametersTester.test(ClustalWParametersTester.java:174)
	at compbio.runner.clustal.ClustalWParametersTester.testConstrainedParametersMinValues(ClustalWParametersTester.java:144)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
	at java.lang.reflect.Method.invoke(Method.java:597)
	at org.testng.internal.MethodHelper.invokeMethod(MethodHelper.java:607)
	at org.testng.internal.Invoker.invokeMethod(Invoker.java:517)
	at org.testng.internal.Invoker.invokeTestMethod(Invoker.java:669)
	at org.testng.internal.Invoker.invokeTestMethods(Invoker.java:956)
	at org.testng.internal.TestMethodWorker.invokeTestMethods(TestMethodWorker.java:126)
	at org.testng.internal.TestMethodWorker.run(TestMethodWorker.java:110)
	at org.testng.TestRunner.runWorkers(TestRunner.java:759)
	at org.testng.TestRunner.privateRun(TestRunner.java:592)
	at org.testng.TestRunner.run(TestRunner.java:486)
	at org.testng.SuiteRunner.runTest(SuiteRunner.java:332)
	at org.testng.SuiteRunner.runSequentially(SuiteRunner.java:327)
	at org.testng.SuiteRunner.privateRun(SuiteRunner.java:299)
	at org.testng.SuiteRunner.run(SuiteRunner.java:204)
	at org.testng.TestNG.createAndRunSuiteRunners(TestNG.java:877)
	at org.testng.TestNG.runSuitesLocally(TestNG.java:842)
	at org.testng.TestNG.run(TestNG.java:751)
	at org.testng.remote.RemoteTestNG.run(RemoteTestNG.java:73)
	at org.testng.remote.RemoteTestNG.main(RemoteTestNG.java:124)
testConstrainedParametersRandomValues 0
java.lang.IllegalArgumentException: Working directory: /homes/pvtroshin/workspace/clustengine/testoutput/local\ClustalW#46979989070571443 is inaccessible or does not exist!
	at compbio.engine.PathValidator.validateDirectory(PathValidator.java:73)
	at compbio.engine.local.ExecutableWrapper.<init>(ExecutableWrapper.java:57)
	at compbio.engine.local.LocalRunner.executeJob(LocalRunner.java:69)
	at compbio.runner.clustal.ClustalWParametersTester.singleTest(ClustalWParametersTester.java:202)
	at compbio.runner.clustal.ClustalWParametersTester.testConstrainedParametersRandomValues(ClustalWParametersTester.java:164)
... Removed 22 stack frames
Click to show all stack frames
java.lang.IllegalArgumentException: Working directory: /homes/pvtroshin/workspace/clustengine/testoutput/local\ClustalW#46979989070571443 is inaccessible or does not exist!
	at compbio.engine.PathValidator.validateDirectory(PathValidator.java:73)
	at compbio.engine.local.ExecutableWrapper.<init>(ExecutableWrapper.java:57)
	at compbio.engine.local.LocalRunner.executeJob(LocalRunner.java:69)
	at compbio.runner.clustal.ClustalWParametersTester.singleTest(ClustalWParametersTester.java:202)
	at compbio.runner.clustal.ClustalWParametersTester.testConstrainedParametersRandomValues(ClustalWParametersTester.java:164)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
	at java.lang.reflect.Method.invoke(Method.java:597)
	at org.testng.internal.MethodHelper.invokeMethod(MethodHelper.java:607)
	at org.testng.internal.Invoker.invokeMethod(Invoker.java:517)
	at org.testng.internal.Invoker.invokeTestMethod(Invoker.java:669)
	at org.testng.internal.Invoker.invokeTestMethods(Invoker.java:956)
	at org.testng.internal.TestMethodWorker.invokeTestMethods(TestMethodWorker.java:126)
	at org.testng.internal.TestMethodWorker.run(TestMethodWorker.java:110)
	at org.testng.TestRunner.runWorkers(TestRunner.java:759)
	at org.testng.TestRunner.privateRun(TestRunner.java:592)
	at org.testng.TestRunner.run(TestRunner.java:486)
	at org.testng.SuiteRunner.runTest(SuiteRunner.java:332)
	at org.testng.SuiteRunner.runSequentially(SuiteRunner.java:327)
	at org.testng.SuiteRunner.privateRun(SuiteRunner.java:299)
	at org.testng.SuiteRunner.run(SuiteRunner.java:204)
	at org.testng.TestNG.createAndRunSuiteRunners(TestNG.java:877)
	at org.testng.TestNG.runSuitesLocally(TestNG.java:842)
	at org.testng.TestNG.run(TestNG.java:751)
	at org.testng.remote.RemoteTestNG.run(RemoteTestNG.java:73)
	at org.testng.remote.RemoteTestNG.main(RemoteTestNG.java:124)
testDefaultParameters 0
java.lang.IllegalArgumentException: Working directory: /homes/pvtroshin/workspace/clustengine/testoutput/local\ClustalW#38979988048124217 is inaccessible or does not exist!
	at compbio.engine.PathValidator.validateDirectory(PathValidator.java:73)
	at compbio.engine.local.ExecutableWrapper.<init>(ExecutableWrapper.java:57)
	at compbio.engine.local.LocalRunner.executeJob(LocalRunner.java:69)
	at compbio.runner.clustal.ClustalWParametersTester.testDefaultParameters(ClustalWParametersTester.java:105)
... Removed 22 stack frames
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java.lang.IllegalArgumentException: Working directory: /homes/pvtroshin/workspace/clustengine/testoutput/local\ClustalW#38979988048124217 is inaccessible or does not exist!
	at compbio.engine.PathValidator.validateDirectory(PathValidator.java:73)
	at compbio.engine.local.ExecutableWrapper.<init>(ExecutableWrapper.java:57)
	at compbio.engine.local.LocalRunner.executeJob(LocalRunner.java:69)
	at compbio.runner.clustal.ClustalWParametersTester.testDefaultParameters(ClustalWParametersTester.java:105)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
	at java.lang.reflect.Method.invoke(Method.java:597)
	at org.testng.internal.MethodHelper.invokeMethod(MethodHelper.java:607)
	at org.testng.internal.Invoker.invokeMethod(Invoker.java:517)
	at org.testng.internal.Invoker.invokeTestMethod(Invoker.java:669)
	at org.testng.internal.Invoker.invokeTestMethods(Invoker.java:956)
	at org.testng.internal.TestMethodWorker.invokeTestMethods(TestMethodWorker.java:126)
	at org.testng.internal.TestMethodWorker.run(TestMethodWorker.java:110)
	at org.testng.TestRunner.runWorkers(TestRunner.java:759)
	at org.testng.TestRunner.privateRun(TestRunner.java:592)
	at org.testng.TestRunner.run(TestRunner.java:486)
	at org.testng.SuiteRunner.runTest(SuiteRunner.java:332)
	at org.testng.SuiteRunner.runSequentially(SuiteRunner.java:327)
	at org.testng.SuiteRunner.privateRun(SuiteRunner.java:299)
	at org.testng.SuiteRunner.run(SuiteRunner.java:204)
	at org.testng.TestNG.createAndRunSuiteRunners(TestNG.java:877)
	at org.testng.TestNG.runSuitesLocally(TestNG.java:842)
	at org.testng.TestNG.run(TestNG.java:751)
	at org.testng.remote.RemoteTestNG.run(RemoteTestNG.java:73)
	at org.testng.remote.RemoteTestNG.main(RemoteTestNG.java:124)
testOptions 0
java.lang.IllegalArgumentException: Working directory: /homes/pvtroshin/workspace/clustengine/testoutput/local\ClustalW#74979988189879815 is inaccessible or does not exist!
	at compbio.engine.PathValidator.validateDirectory(PathValidator.java:73)
	at compbio.engine.local.ExecutableWrapper.<init>(ExecutableWrapper.java:57)
	at compbio.engine.local.LocalRunner.executeJob(LocalRunner.java:69)
	at compbio.runner.clustal.ClustalWParametersTester.singleTest(ClustalWParametersTester.java:202)
	at compbio.runner.clustal.ClustalWParametersTester.test(ClustalWParametersTester.java:183)
	at compbio.runner.clustal.ClustalWParametersTester.testOptions(ClustalWParametersTester.java:122)
... Removed 22 stack frames
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java.lang.IllegalArgumentException: Working directory: /homes/pvtroshin/workspace/clustengine/testoutput/local\ClustalW#74979988189879815 is inaccessible or does not exist!
	at compbio.engine.PathValidator.validateDirectory(PathValidator.java:73)
	at compbio.engine.local.ExecutableWrapper.<init>(ExecutableWrapper.java:57)
	at compbio.engine.local.LocalRunner.executeJob(LocalRunner.java:69)
	at compbio.runner.clustal.ClustalWParametersTester.singleTest(ClustalWParametersTester.java:202)
	at compbio.runner.clustal.ClustalWParametersTester.test(ClustalWParametersTester.java:183)
	at compbio.runner.clustal.ClustalWParametersTester.testOptions(ClustalWParametersTester.java:122)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
	at java.lang.reflect.Method.invoke(Method.java:597)
	at org.testng.internal.MethodHelper.invokeMethod(MethodHelper.java:607)
	at org.testng.internal.Invoker.invokeMethod(Invoker.java:517)
	at org.testng.internal.Invoker.invokeTestMethod(Invoker.java:669)
	at org.testng.internal.Invoker.invokeTestMethods(Invoker.java:956)
	at org.testng.internal.TestMethodWorker.invokeTestMethods(TestMethodWorker.java:126)
	at org.testng.internal.TestMethodWorker.run(TestMethodWorker.java:110)
	at org.testng.TestRunner.runWorkers(TestRunner.java:759)
	at org.testng.TestRunner.privateRun(TestRunner.java:592)
	at org.testng.TestRunner.run(TestRunner.java:486)
	at org.testng.SuiteRunner.runTest(SuiteRunner.java:332)
	at org.testng.SuiteRunner.runSequentially(SuiteRunner.java:327)
	at org.testng.SuiteRunner.privateRun(SuiteRunner.java:299)
	at org.testng.SuiteRunner.run(SuiteRunner.java:204)
	at org.testng.TestNG.createAndRunSuiteRunners(TestNG.java:877)
	at org.testng.TestNG.runSuitesLocally(TestNG.java:842)
	at org.testng.TestNG.run(TestNG.java:751)
	at org.testng.remote.RemoteTestNG.run(RemoteTestNG.java:73)
	at org.testng.remote.RemoteTestNG.main(RemoteTestNG.java:124)
testParameters 0
java.lang.IllegalArgumentException: Working directory: /homes/pvtroshin/workspace/clustengine/testoutput/local\ClustalW#74979987926880363 is inaccessible or does not exist!
	at compbio.engine.PathValidator.validateDirectory(PathValidator.java:73)
	at compbio.engine.local.ExecutableWrapper.<init>(ExecutableWrapper.java:57)
	at compbio.engine.local.LocalRunner.executeJob(LocalRunner.java:69)
	at compbio.runner.clustal.ClustalWParametersTester.singleTest(ClustalWParametersTester.java:202)
	at compbio.runner.clustal.ClustalWParametersTester.test(ClustalWParametersTester.java:183)
	at compbio.runner.clustal.ClustalWParametersTester.testParameters(ClustalWParametersTester.java:129)
... Removed 22 stack frames
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java.lang.IllegalArgumentException: Working directory: /homes/pvtroshin/workspace/clustengine/testoutput/local\ClustalW#74979987926880363 is inaccessible or does not exist!
	at compbio.engine.PathValidator.validateDirectory(PathValidator.java:73)
	at compbio.engine.local.ExecutableWrapper.<init>(ExecutableWrapper.java:57)
	at compbio.engine.local.LocalRunner.executeJob(LocalRunner.java:69)
	at compbio.runner.clustal.ClustalWParametersTester.singleTest(ClustalWParametersTester.java:202)
	at compbio.runner.clustal.ClustalWParametersTester.test(ClustalWParametersTester.java:183)
	at compbio.runner.clustal.ClustalWParametersTester.testParameters(ClustalWParametersTester.java:129)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
	at java.lang.reflect.Method.invoke(Method.java:597)
	at org.testng.internal.MethodHelper.invokeMethod(MethodHelper.java:607)
	at org.testng.internal.Invoker.invokeMethod(Invoker.java:517)
	at org.testng.internal.Invoker.invokeTestMethod(Invoker.java:669)
	at org.testng.internal.Invoker.invokeTestMethods(Invoker.java:956)
	at org.testng.internal.TestMethodWorker.invokeTestMethods(TestMethodWorker.java:126)
	at org.testng.internal.TestMethodWorker.run(TestMethodWorker.java:110)
	at org.testng.TestRunner.runWorkers(TestRunner.java:759)
	at org.testng.TestRunner.privateRun(TestRunner.java:592)
	at org.testng.TestRunner.run(TestRunner.java:486)
	at org.testng.SuiteRunner.runTest(SuiteRunner.java:332)
	at org.testng.SuiteRunner.runSequentially(SuiteRunner.java:327)
	at org.testng.SuiteRunner.privateRun(SuiteRunner.java:299)
	at org.testng.SuiteRunner.run(SuiteRunner.java:204)
	at org.testng.TestNG.createAndRunSuiteRunners(TestNG.java:877)
	at org.testng.TestNG.runSuitesLocally(TestNG.java:842)
	at org.testng.TestNG.run(TestNG.java:751)
	at org.testng.remote.RemoteTestNG.run(RemoteTestNG.java:73)
	at org.testng.remote.RemoteTestNG.main(RemoteTestNG.java:124)
testPresets 0
java.lang.IllegalArgumentException: Working directory: /homes/pvtroshin/workspace/clustengine/testoutput/local\ClustalW#85979987545393788 is inaccessible or does not exist!
	at compbio.engine.PathValidator.validateDirectory(PathValidator.java:73)
	at compbio.engine.local.ExecutableWrapper.<init>(ExecutableWrapper.java:57)
	at compbio.engine.local.LocalRunner.executeJob(LocalRunner.java:69)
	at compbio.runner.clustal.ClustalWParametersTester.singleTest(ClustalWParametersTester.java:202)
	at compbio.runner.clustal.ClustalWParametersTester.testPresets(ClustalWParametersTester.java:231)
... Removed 22 stack frames
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java.lang.IllegalArgumentException: Working directory: /homes/pvtroshin/workspace/clustengine/testoutput/local\ClustalW#85979987545393788 is inaccessible or does not exist!
	at compbio.engine.PathValidator.validateDirectory(PathValidator.java:73)
	at compbio.engine.local.ExecutableWrapper.<init>(ExecutableWrapper.java:57)
	at compbio.engine.local.LocalRunner.executeJob(LocalRunner.java:69)
	at compbio.runner.clustal.ClustalWParametersTester.singleTest(ClustalWParametersTester.java:202)
	at compbio.runner.clustal.ClustalWParametersTester.testPresets(ClustalWParametersTester.java:231)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
	at java.lang.reflect.Method.invoke(Method.java:597)
	at org.testng.internal.MethodHelper.invokeMethod(MethodHelper.java:607)
	at org.testng.internal.Invoker.invokeMethod(Invoker.java:517)
	at org.testng.internal.Invoker.invokeTestMethod(Invoker.java:669)
	at org.testng.internal.Invoker.invokeTestMethods(Invoker.java:956)
	at org.testng.internal.TestMethodWorker.invokeTestMethods(TestMethodWorker.java:126)
	at org.testng.internal.TestMethodWorker.run(TestMethodWorker.java:110)
	at org.testng.TestRunner.runWorkers(TestRunner.java:759)
	at org.testng.TestRunner.privateRun(TestRunner.java:592)
	at org.testng.TestRunner.run(TestRunner.java:486)
	at org.testng.SuiteRunner.runTest(SuiteRunner.java:332)
	at org.testng.SuiteRunner.runSequentially(SuiteRunner.java:327)
	at org.testng.SuiteRunner.privateRun(SuiteRunner.java:299)
	at org.testng.SuiteRunner.run(SuiteRunner.java:204)
	at org.testng.TestNG.createAndRunSuiteRunners(TestNG.java:877)
	at org.testng.TestNG.runSuitesLocally(TestNG.java:842)
	at org.testng.TestNG.run(TestNG.java:751)
	at org.testng.remote.RemoteTestNG.run(RemoteTestNG.java:73)
	at org.testng.remote.RemoteTestNG.main(RemoteTestNG.java:124)