<?xml version="1.0" encoding="UTF-8"?>
<VamsasDocument xmlns="http://www.vamsas.ac.uk/vamsasDocument"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
- xsi:schemaLocation="http://www.vamsas.ac.uk/vamsasDocument file:/homes/jimp/prj/new-eclipse/VamsasClient/schemas/vamsasDocument.xsd">
+ xsi:schemaLocation="http://www.vamsas.ac.uk/vamsasDocument file:vamsasDocument.xsd">
<Version>alpha</Version>
<LockFile>some kind of resolvable session reference.</LockFile>
<Provenance xmlns="http://www.vamsas.org">
</Provenance>
<VAMSAS xmlns="http://www.vamsas.org"></VAMSAS>
<VAMSAS xmlns="http://www.vamsas.org" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.vamsas.org
- http://www.vamsas.ac.uk/build/VamsasClient/schemas/vamsas.xsd">
+ file:vamsas.xsd">
<DataSet>
<Sequence start="1" end="167" dictionary="vamsas:aa" id="a1127235554296">
<sequence>KTAIITGGSRGIGKSIAIKLGKLGASIVLNYRNNTDALKNTIRELEDLNINVIAVQGDISNYKECEKIIKAALDKFNGIDILVNNAGITADNLILRMKEEEFDKVIETNLKGTFNCVKHCIPMIKRRYGKIINISSVVGVAGNVGQCNYAAAKAGVIGFTKSLAKEL</sequence>
<name>Q87N22</name>
</Sequence>
<Alignment gapChar="-">
+ <AlignmentAnnotation type="recombinationbreakpoint" graph="false">
+ <seg start="1" end="163" inclusive="false"/>
+ <annotationElement position="50" after="true">
+ <description>Topali Breakpoint</description>
+ <glyph dict="utf8">?</glyph>
+ </annotationElement>
+ <Provenance>
+ <entry>
+ <User>Jim</User>
+ <App>topali</App>
+ <Action>added-by hand</Action>
+ <Date>2006-09-11</Date>
+ </entry>
+ </Provenance>
+ </AlignmentAnnotation>
<alignmentSequence start="1" end="167" refid="a1127235554296">
<sequence>KTAIITGGSRGIGKSIAIKLGKLGASIVLNYRNNTDALKNTIRELEDLN--INVIAVQGDISNYKECEKIIKAALDKFNG--IDILVNNAGITADNLILRMKEEEFDKVIETNLKGTFNCVKHCIPMIKRRYGKIINISSVVGVAGNVGQCNYAAAKAGVIGFTKSLAKEL</sequence>
<name>Q899P0</name>
<data>somedata</data>
<Instance urn="hmm://myInstancetype"><dataReference>some reference</dataReference></Instance>
</ApplicationData>
-
+ <Attachment xmlns="http://www.vamsas.org" type="HMMER2/HMM" objectref="a1127235554304" compressed="false">
+ <data></data>
+ </Attachment>
</VamsasDocument>