}
/**
- * calculate the render colour for a specific feature using current feature
- * settings.
+ * Returns the configured colour for a specific feature using current feature
+ * settings. This does not include any consideration of feature visibility,
+ * colour transparency, graduated colour shading etc.
*
* @param feature
- * @return render colour for the given feature
+ * @return
*/
public Color getColour(SequenceFeature feature)
{
featureColours.put(featureType, col);
}
+ @Override
public void setTransparency(float value)
{
transparency = value;
}
+ @Override
public float getTransparency()
{
return transparency;