Descriptors live in uk.ac.vamsas.objects.core.descriptors in castor-1.1 xml binding.
[vamsas.git] / src / uk / ac / vamsas / objects / core / AlignmentSequenceDescriptor.java
diff --git a/src/uk/ac/vamsas/objects/core/AlignmentSequenceDescriptor.java b/src/uk/ac/vamsas/objects/core/AlignmentSequenceDescriptor.java
deleted file mode 100644 (file)
index 0bbc06b..0000000
+++ /dev/null
@@ -1,282 +0,0 @@
-/*
- * This class was automatically generated with 
- * <a href="http://www.castor.org">Castor 0.9.9M2</a>, using an XML
- * Schema.
- * $Id$
- */
-
-package uk.ac.vamsas.objects.core;
-
-  //---------------------------------/
- //- Imported classes and packages -/
-//---------------------------------/
-
-import org.exolab.castor.mapping.AccessMode;
-import org.exolab.castor.xml.TypeValidator;
-import org.exolab.castor.xml.XMLFieldDescriptor;
-import org.exolab.castor.xml.validators.*;
-
-/**
- * Class AlignmentSequenceDescriptor.
- * 
- * @version $Revision$ $Date$
- */
-public class AlignmentSequenceDescriptor extends uk.ac.vamsas.objects.core.SequenceTypeDescriptor {
-
-
-      //--------------------------/
-     //- Class/Member Variables -/
-    //--------------------------/
-
-    /**
-     * Field nsPrefix
-     */
-    private java.lang.String nsPrefix;
-
-    /**
-     * Field nsURI
-     */
-    private java.lang.String nsURI;
-
-    /**
-     * Field xmlName
-     */
-    private java.lang.String xmlName;
-
-    /**
-     * Field identity
-     */
-    private org.exolab.castor.xml.XMLFieldDescriptor identity;
-
-
-      //----------------/
-     //- Constructors -/
-    //----------------/
-
-    public AlignmentSequenceDescriptor() 
-     {
-        super();
-        setExtendsWithoutFlatten(new uk.ac.vamsas.objects.core.SequenceTypeDescriptor());
-        nsURI = "http://www.vamsas.ac.uk/schemas/1.0/vamsasTypes";
-        xmlName = "alignmentSequence";
-        
-        //-- set grouping compositor
-        setCompositorAsSequence();
-        org.exolab.castor.xml.util.XMLFieldDescriptorImpl  desc           = null;
-        org.exolab.castor.mapping.FieldHandler             handler        = null;
-        org.exolab.castor.xml.FieldValidator               fieldValidator = null;
-        //-- initialize attribute descriptors
-        
-        //-- _id
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_id", "id", org.exolab.castor.xml.NodeType.Attribute);
-        this.identity = desc;
-        handler = new org.exolab.castor.xml.XMLFieldHandler() {
-            public java.lang.Object getValue( java.lang.Object object ) 
-                throws IllegalStateException
-            {
-                AlignmentSequence target = (AlignmentSequence) object;
-                return target.getId();
-            }
-            public void setValue( java.lang.Object object, java.lang.Object value) 
-                throws IllegalStateException, IllegalArgumentException
-            {
-                try {
-                    AlignmentSequence target = (AlignmentSequence) object;
-                    target.setId( (java.lang.String) value);
-                }
-                catch (java.lang.Exception ex) {
-                    throw new IllegalStateException(ex.toString());
-                }
-            }
-            public java.lang.Object newInstance( java.lang.Object parent ) {
-                return new java.lang.String();
-            }
-        };
-        desc.setHandler(handler);
-        desc.setMultivalued(false);
-        addFieldDescriptor(desc);
-        
-        //-- validation code for: _id
-        fieldValidator = new org.exolab.castor.xml.FieldValidator();
-        { //-- local scope
-        }
-        desc.setValidator(fieldValidator);
-        //-- _refid
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Object.class, "_refid", "refid", org.exolab.castor.xml.NodeType.Attribute);
-        desc.setReference(true);
-        handler = new org.exolab.castor.xml.XMLFieldHandler() {
-            public java.lang.Object getValue( java.lang.Object object ) 
-                throws IllegalStateException
-            {
-                AlignmentSequence target = (AlignmentSequence) object;
-                return target.getRefid();
-            }
-            public void setValue( java.lang.Object object, java.lang.Object value) 
-                throws IllegalStateException, IllegalArgumentException
-            {
-                try {
-                    AlignmentSequence target = (AlignmentSequence) object;
-                    target.setRefid( (java.lang.Object) value);
-                }
-                catch (java.lang.Exception ex) {
-                    throw new IllegalStateException(ex.toString());
-                }
-            }
-            public java.lang.Object newInstance( java.lang.Object parent ) {
-                return new java.lang.Object();
-            }
-        };
-        desc.setHandler(handler);
-        desc.setRequired(true);
-        desc.setMultivalued(false);
-        addFieldDescriptor(desc);
-        
-        //-- validation code for: _refid
-        fieldValidator = new org.exolab.castor.xml.FieldValidator();
-        fieldValidator.setMinOccurs(1);
-        { //-- local scope
-        }
-        desc.setValidator(fieldValidator);
-        //-- initialize element descriptors
-        
-        //-- _alignmentSequenceAnnotationList
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(uk.ac.vamsas.objects.core.AlignmentSequenceAnnotation.class, "_alignmentSequenceAnnotationList", "AlignmentSequenceAnnotation", org.exolab.castor.xml.NodeType.Element);
-        handler = new org.exolab.castor.xml.XMLFieldHandler() {
-            public java.lang.Object getValue( java.lang.Object object ) 
-                throws IllegalStateException
-            {
-                AlignmentSequence target = (AlignmentSequence) object;
-                return target.getAlignmentSequenceAnnotation();
-            }
-            public void setValue( java.lang.Object object, java.lang.Object value) 
-                throws IllegalStateException, IllegalArgumentException
-            {
-                try {
-                    AlignmentSequence target = (AlignmentSequence) object;
-                    target.addAlignmentSequenceAnnotation( (uk.ac.vamsas.objects.core.AlignmentSequenceAnnotation) value);
-                }
-                catch (java.lang.Exception ex) {
-                    throw new IllegalStateException(ex.toString());
-                }
-            }
-            public java.lang.Object newInstance( java.lang.Object parent ) {
-                return new uk.ac.vamsas.objects.core.AlignmentSequenceAnnotation();
-            }
-        };
-        desc.setHandler(handler);
-        desc.setNameSpaceURI("http://www.vamsas.ac.uk/schemas/1.0/vamsasTypes");
-        desc.setMultivalued(true);
-        addFieldDescriptor(desc);
-        
-        //-- validation code for: _alignmentSequenceAnnotationList
-        fieldValidator = new org.exolab.castor.xml.FieldValidator();
-        fieldValidator.setMinOccurs(0);
-        { //-- local scope
-        }
-        desc.setValidator(fieldValidator);
-    } //-- uk.ac.vamsas.objects.core.AlignmentSequenceDescriptor()
-
-
-      //-----------/
-     //- Methods -/
-    //-----------/
-
-    /**
-     * Method getAccessMode
-     * 
-     * 
-     * 
-     * @return AccessMode
-     */
-    public org.exolab.castor.mapping.AccessMode getAccessMode()
-    {
-        return null;
-    } //-- org.exolab.castor.mapping.AccessMode getAccessMode() 
-
-    /**
-     * Method getExtends
-     * 
-     * 
-     * 
-     * @return ClassDescriptor
-     */
-    public org.exolab.castor.mapping.ClassDescriptor getExtends()
-    {
-        return super.getExtends();
-    } //-- org.exolab.castor.mapping.ClassDescriptor getExtends() 
-
-    /**
-     * Method getIdentity
-     * 
-     * 
-     * 
-     * @return FieldDescriptor
-     */
-    public org.exolab.castor.mapping.FieldDescriptor getIdentity()
-    {
-        if (identity == null)
-            return super.getIdentity();
-        return identity;
-    } //-- org.exolab.castor.mapping.FieldDescriptor getIdentity() 
-
-    /**
-     * Method getJavaClass
-     * 
-     * 
-     * 
-     * @return Class
-     */
-    public java.lang.Class getJavaClass()
-    {
-        return uk.ac.vamsas.objects.core.AlignmentSequence.class;
-    } //-- java.lang.Class getJavaClass() 
-
-    /**
-     * Method getNameSpacePrefix
-     * 
-     * 
-     * 
-     * @return String
-     */
-    public java.lang.String getNameSpacePrefix()
-    {
-        return nsPrefix;
-    } //-- java.lang.String getNameSpacePrefix() 
-
-    /**
-     * Method getNameSpaceURI
-     * 
-     * 
-     * 
-     * @return String
-     */
-    public java.lang.String getNameSpaceURI()
-    {
-        return nsURI;
-    } //-- java.lang.String getNameSpaceURI() 
-
-    /**
-     * Method getValidator
-     * 
-     * 
-     * 
-     * @return TypeValidator
-     */
-    public org.exolab.castor.xml.TypeValidator getValidator()
-    {
-        return this;
-    } //-- org.exolab.castor.xml.TypeValidator getValidator() 
-
-    /**
-     * Method getXMLName
-     * 
-     * 
-     * 
-     * @return String
-     */
-    public java.lang.String getXMLName()
-    {
-        return xmlName;
-    } //-- java.lang.String getXMLName() 
-
-}