X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=.classpath;h=8aef745af8faa40dd2e2fcb5a29d8af9ae4a3acc;hb=7585bdc21653bdb66d604ed5efa95497f28c7eb5;hp=90323de8d3e1f3003b1490d352ff7cfe96934d36;hpb=694a4734e2f664aeb8075e6af93d56e90135ad3e;p=jalview.git

diff --git a/.classpath b/.classpath
index 90323de..8aef745 100644
--- a/.classpath
+++ b/.classpath
@@ -36,22 +36,19 @@
 	<classpathentry kind="lib" path="lib/miglayout-4.0-swing.jar"/>
 	<classpathentry kind="lib" path="lib/jswingreader-0.3.jar" sourcepath="/jswingreader"/>
 	<classpathentry kind="lib" path="lib/commons-codec-1.3.jar"/>
-	<classpathentry kind="lib" path="lib/Jmol-12.2.4.jar" sourcepath="/Users/jimp/Documents/e6-workspace-new/Jmol/src"/>
-	<classpathentry kind="lib" path="appletlib/JmolApplet-12.2.4.jar"/>
 	<classpathentry kind="lib" path="lib/jdas-1.0.4.jar"/>
 	<classpathentry kind="lib" path="lib/spring-core-3.0.5.RELEASE.jar"/>
 	<classpathentry kind="lib" path="lib/spring-web-3.0.5.RELEASE.jar"/>
-	<classpathentry kind="lib" path="lib/groovy-all-1.8.2.jar"/>
 	<classpathentry kind="lib" path="lib/min-jabaws-client-2.1.0.jar" sourcepath="/clustengine"/>
 	<classpathentry kind="lib" path="lib/json_simple-1.1.jar" sourcepath="/Users/jimp/Downloads/json_simple-1.1-all.zip"/>
 	<classpathentry kind="lib" path="lib/slf4j-api-1.7.7.jar"/>
 	<classpathentry kind="lib" path="lib/jsoup-1.8.1.jar"/>
 	<classpathentry kind="lib" path="lib/log4j-to-slf4j-2.0-rc2.jar"/>
 	<classpathentry kind="lib" path="lib/slf4j-log4j12-1.7.7.jar"/>
-	<classpathentry kind="lib" path="lib/VARNAv3-91.jar"/>
+	<classpathentry kind="lib" path="lib/VARNAv3-93.jar"/>
 	<classpathentry kind="lib" path="lib/jfreesvg-2.1.jar"/>
 	<classpathentry kind="lib" path="lib/quaqua-filechooser-only-8.0.jar"/>
-	<classpathentry kind="lib" path="lib/htsjdk-1.120-SNAPSHOT.jar"/>
+	<classpathentry kind="lib" path="lib/htsjdk-1.133.jar"/>
 	<classpathentry kind="con" path="org.eclipse.jdt.USER_LIBRARY/plugin"/>
 	<classpathentry kind="lib" path="lib/xml-apis.jar"/>
 	<classpathentry kind="con" path="org.eclipse.jdt.junit.JUNIT_CONTAINER/4"/>
@@ -67,5 +64,10 @@
 	<classpathentry kind="lib" path="lib/jetty-http-9.2.10.v20150310.jar"/>
 	<classpathentry kind="lib" path="lib/jetty-io-9.2.10.v20150310.jar"/>
 	<classpathentry kind="lib" path="lib/java-json.jar"/>
+	<classpathentry kind="lib" path="lib/Jmol-14.6.4_2016.10.26.jar"/>
+	<classpathentry kind="con" path="org.testng.TESTNG_CONTAINER"/>
+	<classpathentry kind="lib" path="lib/biojava-core-4.1.0.jar"/>
+	<classpathentry kind="lib" path="lib/biojava-ontology-4.1.0.jar"/>
+	<classpathentry kind="lib" path="lib/groovy-all-2.4.6-indy.jar"/>
 	<classpathentry kind="output" path="classes"/>
 </classpath>