X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=src%2Fjalview%2Fgui%2FAlignFrame.java;fp=src%2Fjalview%2Fgui%2FAlignFrame.java;h=e6b7af495fa3cf0d4bb278e0e2706f12cdd81dc4;hb=006dda109bba6b7e6323c81d47d09f762ec1e205;hp=bf9888c0d5ac924832023a782595f2cfd069f8ba;hpb=c3e47d769fd4d7556a2f266ae7a7047f7541aa11;p=jalview.git

diff --git a/src/jalview/gui/AlignFrame.java b/src/jalview/gui/AlignFrame.java
index bf9888c..e6b7af4 100644
--- a/src/jalview/gui/AlignFrame.java
+++ b/src/jalview/gui/AlignFrame.java
@@ -263,15 +263,17 @@ public class AlignFrame extends GAlignFrame implements DropTargetListener,
           int width, int height, String sequenceSetId, String viewId)
   {
     setSize(width, height);
-    viewport = new AlignViewport(al, hiddenColumns, sequenceSetId, viewId);
-
-    alignPanel = new AlignmentPanel(this, viewport);
 
     if (al.getDataset() == null)
     {
       al.setDataset(null);
     }
 
+    viewport = new AlignViewport(al, hiddenColumns, sequenceSetId, viewId);
+
+    alignPanel = new AlignmentPanel(this, viewport);
+
+
     addAlignmentPanel(alignPanel, true);
     init();
   }