X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=src%2Fuk%2Fac%2Fvamsas%2Fobjects%2Futils%2Ftrees%2FNewickFile.java;h=d6f5f5719634d1216e0bafb27320ff204e6bfad3;hb=58cfc02bd5edea846480b0f893508baa2e48f05b;hp=4fd878ca1fbc51c14a35d0d36eef477656d590f4;hpb=86ecb3c4f9e8cf7150cf71f8a40d65003bb05d2d;p=vamsas.git

diff --git a/src/uk/ac/vamsas/objects/utils/trees/NewickFile.java b/src/uk/ac/vamsas/objects/utils/trees/NewickFile.java
index 4fd878c..d6f5f57 100644
--- a/src/uk/ac/vamsas/objects/utils/trees/NewickFile.java
+++ b/src/uk/ac/vamsas/objects/utils/trees/NewickFile.java
@@ -56,7 +56,7 @@ public class NewickFile {
   // File IO Flags
   boolean ReplaceUnderscores = true;
 
-  boolean printRootInfo = false;
+  boolean printRootInfo = true; // in case root has anything to preserve
 
   private Pattern[] NodeSafeName = new Pattern[] {
       Pattern.compile("[\\[,:'()]"), // test for requiring quotes