X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=binaries%2Fsrc%2FViennaRNA%2Fdoc%2Flatex%2Fgroup__consensus__stochbt.tex;fp=binaries%2Fsrc%2FViennaRNA%2Fdoc%2Flatex%2Fgroup__consensus__stochbt.tex;h=f28f14d6434fd64370f38b916f7741fd3de26c0c;hb=6ccf6e7acc4d35484ae6ad0f03d22c19b8ce63fc;hp=0000000000000000000000000000000000000000;hpb=f96c106fc2e76aff65de8adebdd31069fe3a1a05;p=jabaws.git diff --git a/binaries/src/ViennaRNA/doc/latex/group__consensus__stochbt.tex b/binaries/src/ViennaRNA/doc/latex/group__consensus__stochbt.tex new file mode 100644 index 0000000..f28f14d --- /dev/null +++ b/binaries/src/ViennaRNA/doc/latex/group__consensus__stochbt.tex @@ -0,0 +1,43 @@ +\hypertarget{group__consensus__stochbt}{\section{Stochastic Backtracking of Consensus Structures from Sequence Alignment(s)} +\label{group__consensus__stochbt}\index{Stochastic Backtracking of Consensus Structures from Sequence Alignment(s)@{Stochastic Backtracking of Consensus Structures from Sequence Alignment(s)}} +} +Collaboration diagram for Stochastic Backtracking of Consensus Structures from Sequence Alignment(s)\-: +\nopagebreak +\begin{figure}[H] +\begin{center} +\leavevmode +\includegraphics[width=350pt]{group__consensus__stochbt} +\end{center} +\end{figure} +\subsection*{Functions} +\begin{DoxyCompactItemize} +\item +char $\ast$ \hyperlink{group__consensus__stochbt_ga0df40248788f0fb17ebdc59d74116d1c}{alipbacktrack} (double $\ast$prob) +\begin{DoxyCompactList}\small\item\em Sample a consensus secondary structure from the Boltzmann ensemble according its probability\par +. \end{DoxyCompactList}\end{DoxyCompactItemize} + + +\subsection{Detailed Description} + + +\subsection{Function Documentation} +\hypertarget{group__consensus__stochbt_ga0df40248788f0fb17ebdc59d74116d1c}{\index{Stochastic Backtracking of Consensus Structures from Sequence Alignment(s)@{Stochastic Backtracking of Consensus Structures from Sequence Alignment(s)}!alipbacktrack@{alipbacktrack}} +\index{alipbacktrack@{alipbacktrack}!Stochastic Backtracking of Consensus Structures from Sequence Alignment(s)@{Stochastic Backtracking of Consensus Structures from Sequence Alignment(s)}} +\subsubsection[{alipbacktrack}]{\setlength{\rightskip}{0pt plus 5cm}char$\ast$ alipbacktrack ( +\begin{DoxyParamCaption} +\item[{double $\ast$}]{prob} +\end{DoxyParamCaption} +)}}\label{group__consensus__stochbt_ga0df40248788f0fb17ebdc59d74116d1c} + + +Sample a consensus secondary structure from the Boltzmann ensemble according its probability\par +. + + +\begin{DoxyParams}{Parameters} +{\em prob} & to be described (berni) \\ +\hline +\end{DoxyParams} +\begin{DoxyReturn}{Returns} +A sampled consensus secondary structure in dot-\/bracket notation +\end{DoxyReturn}