X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=binaries%2Fsrc%2Fclustalo%2Fsrc%2Fclustal-omega-config.h;fp=binaries%2Fsrc%2Fclustalo%2Fsrc%2Fclustal-omega-config.h;h=765f97fa4b69ff56b2ef9e1702bcfd7cba72b1db;hb=35947b9e0b6ae1be74f17d15cd6a65ceadc6d310;hp=0000000000000000000000000000000000000000;hpb=e7bf02d1c203bc8d88b9095e89d5ca6cce21a882;p=jabaws.git diff --git a/binaries/src/clustalo/src/clustal-omega-config.h b/binaries/src/clustalo/src/clustal-omega-config.h new file mode 100644 index 0000000..765f97f --- /dev/null +++ b/binaries/src/clustalo/src/clustal-omega-config.h @@ -0,0 +1,348 @@ +#ifndef _SRC_CLUSTAL_OMEGA_CONFIG_H +#define _SRC_CLUSTAL_OMEGA_CONFIG_H 1 + +/* src/clustal-omega-config.h. Generated automatically at end of configure. */ +/* src/config.h. Generated from config.h.in by configure. */ +/* src/config.h.in. Generated from configure.ac by autoheader. */ + +/* Define if building universal (internal helper macro) */ +/* #undef AC_APPLE_UNIVERSAL_BUILD */ + +/* Let all files know they are being used inside Clustal Omega */ +#ifndef CLUSTAL_OMEGA_CLUSTALO +#define CLUSTAL_OMEGA_CLUSTALO 1 +#endif + +/* This is a CYGWIN system */ +/* #undef CYGWIN */ + +/* This is a Darwin system */ +/* #undef DARWIN */ + +/* Define to 1 if you have the header file. */ +#ifndef CLUSTAL_OMEGA_HAVE_ARGTABLE2_H +#define CLUSTAL_OMEGA_HAVE_ARGTABLE2_H 1 +#endif + +/* Define to 1 if you have the header file. */ +#ifndef CLUSTAL_OMEGA_HAVE_ASSERT_H +#define CLUSTAL_OMEGA_HAVE_ASSERT_H 1 +#endif + +/* Define to 1 if you have the header file. */ +#ifndef CLUSTAL_OMEGA_HAVE_CTYPE_H +#define CLUSTAL_OMEGA_HAVE_CTYPE_H 1 +#endif + +/* Define to 1 if you have the header file. */ +#ifndef CLUSTAL_OMEGA_HAVE_DLFCN_H +#define CLUSTAL_OMEGA_HAVE_DLFCN_H 1 +#endif + +/* Define to 1 if you have the header file. */ +#ifndef CLUSTAL_OMEGA_HAVE_FLOAT_H +#define CLUSTAL_OMEGA_HAVE_FLOAT_H 1 +#endif + +/* Define to 1 if you have the `fseek64' function. */ +/* #undef HAVE_FSEEK64 */ + +/* Define to 1 if you have the `fseeko' function. */ +#ifndef CLUSTAL_OMEGA_HAVE_FSEEKO +#define CLUSTAL_OMEGA_HAVE_FSEEKO 1 +#endif + +/* Define to 1 if you have the `fseeko64' function. */ +#ifndef CLUSTAL_OMEGA_HAVE_FSEEKO64 +#define CLUSTAL_OMEGA_HAVE_FSEEKO64 1 +#endif + +/* Define to 1 if you have the `ftell64' function. */ +/* #undef HAVE_FTELL64 */ + +/* Define to 1 if you have the `ftello' function. */ +#ifndef CLUSTAL_OMEGA_HAVE_FTELLO +#define CLUSTAL_OMEGA_HAVE_FTELLO 1 +#endif + +/* Define to 1 if you have the `ftello64' function. */ +#ifndef CLUSTAL_OMEGA_HAVE_FTELLO64 +#define CLUSTAL_OMEGA_HAVE_FTELLO64 1 +#endif + +/* Define to 1 if you have the header file. */ +#ifndef CLUSTAL_OMEGA_HAVE_INTTYPES_H +#define CLUSTAL_OMEGA_HAVE_INTTYPES_H 1 +#endif + +/* Define to 1 if you have the `argtable2' library (-largtable2). */ +#ifndef CLUSTAL_OMEGA_HAVE_LIBARGTABLE2 +#define CLUSTAL_OMEGA_HAVE_LIBARGTABLE2 1 +#endif + +/* Define to 1 if you have the `m' library (-lm). */ +#ifndef CLUSTAL_OMEGA_HAVE_LIBM +#define CLUSTAL_OMEGA_HAVE_LIBM 1 +#endif + +/* Define to 1 if you have the header file. */ +#ifndef CLUSTAL_OMEGA_HAVE_LIMITS_H +#define CLUSTAL_OMEGA_HAVE_LIMITS_H 1 +#endif + +/* Has log2() */ +#ifndef CLUSTAL_OMEGA_HAVE_LOG2 +#define CLUSTAL_OMEGA_HAVE_LOG2 1 +#endif + +/* Define to 1 if you have the header file. */ +#ifndef CLUSTAL_OMEGA_HAVE_MATH_H +#define CLUSTAL_OMEGA_HAVE_MATH_H 1 +#endif + +/* Define to 1 if you have the header file. */ +#ifndef CLUSTAL_OMEGA_HAVE_MEMORY_H +#define CLUSTAL_OMEGA_HAVE_MEMORY_H 1 +#endif + +/* Define to 1 if you have the `ntohl' function. */ +#ifndef CLUSTAL_OMEGA_HAVE_NTOHL +#define CLUSTAL_OMEGA_HAVE_NTOHL 1 +#endif + +/* Define to 1 if you have the `ntohs' function. */ +#ifndef CLUSTAL_OMEGA_HAVE_NTOHS +#define CLUSTAL_OMEGA_HAVE_NTOHS 1 +#endif + +/* Define to 1 if you have the `ntonl' function. */ +/* #undef HAVE_NTONL */ + +/* Define to 1 if you have the `ntons' function. */ +/* #undef HAVE_NTONS */ + +/* Defined if OpenMP should and can be used */ +#ifndef CLUSTAL_OMEGA_HAVE_OPENMP +#define CLUSTAL_OMEGA_HAVE_OPENMP 1 +#endif + +/* Define to 1 if you have the header file. */ +#ifndef CLUSTAL_OMEGA_HAVE_STDARG_H +#define CLUSTAL_OMEGA_HAVE_STDARG_H 1 +#endif + +/* Define to 1 if you have the header file. */ +#ifndef CLUSTAL_OMEGA_HAVE_STDINT_H +#define CLUSTAL_OMEGA_HAVE_STDINT_H 1 +#endif + +/* Define to 1 if you have the header file. */ +#ifndef CLUSTAL_OMEGA_HAVE_STDIO_H +#define CLUSTAL_OMEGA_HAVE_STDIO_H 1 +#endif + +/* Define to 1 if you have the header file. */ +#ifndef CLUSTAL_OMEGA_HAVE_STDLIB_H +#define CLUSTAL_OMEGA_HAVE_STDLIB_H 1 +#endif + +/* Define to 1 if you have the header file. */ +#ifndef CLUSTAL_OMEGA_HAVE_STRINGS_H +#define CLUSTAL_OMEGA_HAVE_STRINGS_H 1 +#endif + +/* Define to 1 if you have the header file. */ +#ifndef CLUSTAL_OMEGA_HAVE_STRING_H +#define CLUSTAL_OMEGA_HAVE_STRING_H 1 +#endif + +/* Define to 1 if you have the `stroul' function. */ +/* #undef HAVE_STROUL */ + +/* Define to 1 if you have the `strtoull' function. */ +#ifndef CLUSTAL_OMEGA_HAVE_STRTOULL +#define CLUSTAL_OMEGA_HAVE_STRTOULL 1 +#endif + +/* Define to 1 if you have the header file. */ +#ifndef CLUSTAL_OMEGA_HAVE_SYS_STAT_H +#define CLUSTAL_OMEGA_HAVE_SYS_STAT_H 1 +#endif + +/* Define to 1 if you have the header file. */ +#ifndef CLUSTAL_OMEGA_HAVE_SYS_TYPES_H +#define CLUSTAL_OMEGA_HAVE_SYS_TYPES_H 1 +#endif + +/* Define to 1 if you have the header file. */ +#ifndef CLUSTAL_OMEGA_HAVE_TIME_H +#define CLUSTAL_OMEGA_HAVE_TIME_H 1 +#endif + +/* Define to 1 if you have the header file. */ +#ifndef CLUSTAL_OMEGA_HAVE_UNISTD_H +#define CLUSTAL_OMEGA_HAVE_UNISTD_H 1 +#endif + +/* This is a LINUX system */ +#ifndef CLUSTAL_OMEGA_LINUX +#define CLUSTAL_OMEGA_LINUX 1 +#endif + +/* Define to the sub-directory in which libtool stores uninstalled libraries. + */ +#ifndef CLUSTAL_OMEGA_LT_OBJDIR +#define CLUSTAL_OMEGA_LT_OBJDIR ".libs/" +#endif + +/* This is a MinGW system */ +/* #undef MINGW */ + +/* No-debug Mode */ +#ifndef CLUSTAL_OMEGA_NDEBUG +#define CLUSTAL_OMEGA_NDEBUG /**/ +#endif + +/* Some strange OS */ +/* #undef OTHEROS */ + +/* Name of package */ +#ifndef CLUSTAL_OMEGA_PACKAGE +#define CLUSTAL_OMEGA_PACKAGE "clustal-omega" +#endif + +/* Define to the address where bug reports for this package should be sent. */ +#ifndef CLUSTAL_OMEGA_PACKAGE_BUGREPORT +#define CLUSTAL_OMEGA_PACKAGE_BUGREPORT "clustalw@ucd.ie" +#endif + +/* The package code name */ +#ifndef CLUSTAL_OMEGA_PACKAGE_CODENAME +#define CLUSTAL_OMEGA_PACKAGE_CODENAME "DeshilHollesEamus" +#endif + +/* Define to the full name of this package. */ +#ifndef CLUSTAL_OMEGA_PACKAGE_NAME +#define CLUSTAL_OMEGA_PACKAGE_NAME "Clustal Omega" +#endif + +/* Define to the full name and version of this package. */ +#ifndef CLUSTAL_OMEGA_PACKAGE_STRING +#define CLUSTAL_OMEGA_PACKAGE_STRING "Clustal Omega 1.0.2" +#endif + +/* Define to the one symbol short name of this package. */ +#ifndef CLUSTAL_OMEGA_PACKAGE_TARNAME +#define CLUSTAL_OMEGA_PACKAGE_TARNAME "clustal-omega" +#endif + +/* Define to the version of this package. */ +#ifndef CLUSTAL_OMEGA_PACKAGE_VERSION +#define CLUSTAL_OMEGA_PACKAGE_VERSION "1.0.2" +#endif + +/* The size of `fpos_t', as computed by sizeof. */ +#ifndef CLUSTAL_OMEGA_SIZEOF_FPOS_T +#define CLUSTAL_OMEGA_SIZEOF_FPOS_T 16 +#endif + +/* The size of `unsigned int', as computed by sizeof. */ +#ifndef CLUSTAL_OMEGA_SIZEOF_UNSIGNED_INT +#define CLUSTAL_OMEGA_SIZEOF_UNSIGNED_INT 4 +#endif + +/* The size of `unsigned long', as computed by sizeof. */ +#ifndef CLUSTAL_OMEGA_SIZEOF_UNSIGNED_LONG +#define CLUSTAL_OMEGA_SIZEOF_UNSIGNED_LONG 8 +#endif + +/* The size of `unsigned long long', as computed by sizeof. */ +#ifndef CLUSTAL_OMEGA_SIZEOF_UNSIGNED_LONG_LONG +#define CLUSTAL_OMEGA_SIZEOF_UNSIGNED_LONG_LONG 8 +#endif + +/* The size of `unsigned short', as computed by sizeof. */ +#ifndef CLUSTAL_OMEGA_SIZEOF_UNSIGNED_SHORT +#define CLUSTAL_OMEGA_SIZEOF_UNSIGNED_SHORT 2 +#endif + +/* This is a Solaris system */ +/* #undef SOLARIS */ + +/* This is a BSD system */ +/* #undef SOMEBSD */ + +/* Define to 1 if you have the ANSI C header files. */ +#ifndef CLUSTAL_OMEGA_STDC_HEADERS +#define CLUSTAL_OMEGA_STDC_HEADERS 1 +#endif + +/* Enable extensions on AIX 3, Interix. */ +#ifndef _ALL_SOURCE +# define _ALL_SOURCE 1 +#endif +/* Enable GNU extensions on systems that have them. */ +#ifndef _GNU_SOURCE +# define _GNU_SOURCE 1 +#endif +/* Enable threading extensions on Solaris. */ +#ifndef _POSIX_PTHREAD_SEMANTICS +# define _POSIX_PTHREAD_SEMANTICS 1 +#endif +/* Enable extensions on HP NonStop. */ +#ifndef _TANDEM_SOURCE +# define _TANDEM_SOURCE 1 +#endif +/* Enable general extensions on Solaris. */ +#ifndef __EXTENSIONS__ +# define __EXTENSIONS__ 1 +#endif + + +/* Version number of package */ +#ifndef CLUSTAL_OMEGA_VERSION +#define CLUSTAL_OMEGA_VERSION "1.0.2" +#endif + +/* Define if using the dmalloc debugging malloc package */ +/* #undef WITH_DMALLOC */ + +/* Define WORDS_BIGENDIAN to 1 if your processor stores words with the most + significant byte first (like Motorola and SPARC, unlike Intel). */ +#if defined AC_APPLE_UNIVERSAL_BUILD +# if defined __BIG_ENDIAN__ +# define WORDS_BIGENDIAN 1 +# endif +#else +# ifndef WORDS_BIGENDIAN +/* # undef WORDS_BIGENDIAN */ +# endif +#endif + +/* Define to 1 if on MINIX. */ +/* #undef _MINIX */ + +/* Define to 2 if the system does not provide POSIX.1 features except with + this defined. */ +/* #undef _POSIX_1_SOURCE */ + +/* Define to 1 if you need to in order for `stat' and other things to work. */ +/* #undef _POSIX_SOURCE */ + +/* Define to empty if `const' does not conform to ANSI C. */ +/* #undef const */ + +/* Define to `__inline__' or `__inline' if that's what the C compiler + calls it, or to nothing if 'inline' is not supported under any name. */ +#ifndef __cplusplus +/* #undef inline */ +#endif + +/* Define to `long int' if does not define. */ +/* #undef off_t */ + +/* Define to `unsigned int' if does not define. */ +/* #undef size_t */ + +/* once: _SRC_CLUSTAL_OMEGA_CONFIG_H */ +#endif