X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=build.xml;h=575c193aeb0e7048cb0cd8a29f81b9c06323b7ad;hb=917d7bbb140b99761a96008a44910bb2a10022f1;hp=ae600aa4a7682e0b562822abc8d064f08d9cc36c;hpb=277f4125a892a919915fc168bf2648be3894a010;p=vamsas.git

diff --git a/build.xml b/build.xml
index ae600aa..575c193 100644
--- a/build.xml
+++ b/build.xml
@@ -45,12 +45,13 @@
 		<delete>
 			<fileset dir="${sourceDir}/${vamsas.schema.package.src}">
 				<include name="*.java"/>
+				<include name="descriptors/*.java"/>
 			</fileset>
 		</delete>
 	</target>
 	<target name="makecoresource" depends="init, cleancoresource" description="Generate Java source files from XSD.">
 	<taskdef name="castor-srcgen"
-		  classname="org.exolab.castor.tools.ant.taskdefs.CastorSourceGenTask"
+		  classname="org.castor.anttask.CastorCodeGenTask"
 	      classpathref="castor.classpath" />
 	<!-- Should apply this to every schema file in ${vamsas.schemas} directory -->
 		<castor-srcgen file="${vamsas.schema}"
@@ -123,7 +124,6 @@ inheritRefs="true"/> -->
 	          <exclude name="**/*.jar.*" />
 			  <exclude name="*.java"/>
 			  <exclude name="**/*.java"/>
-			  <exclude name="uk/**"/>
 			  <exclude name="uk/*.class"/>
 			  <exclude name="log4j.properties"/>
 			<exclude name="commons-logging.properties"/>
@@ -132,7 +132,7 @@ inheritRefs="true"/> -->
 	</target>
 	
 	<target name="javadoc" depends="init">
-  	<javadoc destdir="docs/api" author="true" version="true" use="true">  	  
+  	<javadoc destdir="docs/api"  classpathref="build.classpath" author="true" version="true" use="true">  	  
       <fileset dir="${sourceDir}" defaultexcludes="yes">
       	<exclude name="**/.castor.cdr"/>
       	<!-- this was for the old ebi packages.