X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=datadb%2Fcompbio%2Fcassandra%2FCassandraReaderOld.java;h=c7176b0fe95773d4230cef003353a05daa8345f9;hb=006363dc999cef4e9c49dd6a38ea0d78cbb62472;hp=f29bc9f3b9954f7b135b9615206084684ba5b206;hpb=23ef7a6a36233ee82656f6d0f602b82f009847ed;p=proteocache.git diff --git a/datadb/compbio/cassandra/CassandraReaderOld.java b/datadb/compbio/cassandra/CassandraReaderOld.java index f29bc9f..c7176b0 100644 --- a/datadb/compbio/cassandra/CassandraReaderOld.java +++ b/datadb/compbio/cassandra/CassandraReaderOld.java @@ -12,6 +12,10 @@ import com.datastax.driver.core.Row; import com.datastax.driver.core.Session; import com.datastax.driver.core.ResultSet; +import compbio.beans.DateBean; +import compbio.beans.JobBean; +import compbio.beans.ProteinBean; +import compbio.beans.Total; import compbio.engine.JobStatus; public class CassandraReaderOld { @@ -217,7 +221,7 @@ public class CassandraReaderOld { for (Row r : rows) { String prot = r.getString("Protein"); String prediction = findJnetpred(r.getMap("Predictions", String.class, String.class)); - if (prot != null || prediction != null) + if (prot != null || prediction != null) res.put(prot, prediction); } final long endTime = System.currentTimeMillis(); @@ -225,13 +229,14 @@ public class CassandraReaderOld { return res; } - private String findJnetpred (Map pred) { + private String findJnetpred(Map pred) { if (pred != null) { - if (pred.containsKey("jnetpred")) + if (pred.containsKey("jnetpred")) return pred.get("jnetpred"); } return null; } + /* * getting protein sequences by counter */