X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=datadb%2Fcompbio%2Fcassandra%2Freaders%2FSequenceReader.java;h=e64d215e90314e2a72ee04295b1aeffc54e2b662;hb=35b37efa6569c5d2c5900f1f2aa69625c609d1d1;hp=3c0d6e625c8d4e74964c76b3e309e4dc9b45a88b;hpb=a4e4432c6f5812208d72d9f6bea7aff1aa850817;p=proteocache.git diff --git a/datadb/compbio/cassandra/readers/SequenceReader.java b/datadb/compbio/cassandra/readers/SequenceReader.java index 3c0d6e6..e64d215 100644 --- a/datadb/compbio/cassandra/readers/SequenceReader.java +++ b/datadb/compbio/cassandra/readers/SequenceReader.java @@ -56,11 +56,10 @@ public class SequenceReader extends CassandraReader { String protein = r.getString("Protein"); if (protein.matches("(.*)" + sequence + "(.*)")) { ProteinBean foundsequence = new ProteinBean(protein, r.getMap("Predictions", String.class, String.class)); + foundsequence.setJobid(r.getString("JobID")); query.add(foundsequence); } } - } - if (searchtype.equals("partial")) { for (ProteinBean entry : query) { entry.setSubProt(CreateSubprotein(entry.getSequence(), sequence)); }