X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=engine%2Fcompbio%2Fengine%2FJpredJob.java;fp=engine%2Fcompbio%2Fengine%2FJpredJob.java;h=99981e4fcfe51bf5c42985cadff802826ccf3c0d;hb=9bb6ee99ca7f738fac1087190b5481b8fe6e8d9f;hp=db4a7fe5c262606406cedb34bbed3762d5e29fb0;hpb=2e3f6b76be585306f1003d849831840c0adb3360;p=proteocache.git

diff --git a/engine/compbio/engine/JpredJob.java b/engine/compbio/engine/JpredJob.java
index db4a7fe..99981e4 100644
--- a/engine/compbio/engine/JpredJob.java
+++ b/engine/compbio/engine/JpredJob.java
@@ -17,17 +17,15 @@ public class JpredJob extends Job {
 
 	public JpredJob(String jobid, String date1, String date2) {
 		super(jobid, date1, date2);
-		this.protein = protein;
 		predictions = new ArrayList<FastaSequence>();
-		alignment  = new ArrayList<FastaSequence>();
+		alignment = new ArrayList<FastaSequence>();
 		log = "";
 	}
 
 	public JpredJob(String jobid, String date1, String date2, List<FastaSequence> alignment, List<FastaSequence> predictions) {
 		super(jobid, date1, date2);
-		this.protein = protein;
 		this.alignment = alignment;
-		this.predictions = predictions; 
+		this.predictions = predictions;
 	}
 
 	public void setProtein(String protein) {