X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=examples%2Fgroovy%2FComputePeptideVariants.groovy;h=e5ece514e6dbc035b8b10ba54221540c8863cde6;hb=HEAD;hp=6caa69c1dbeb2d5f8103f79ba76694bc6557b2ac;hpb=cfcd397b19f70fb39d6d21437db8eb6ffcac3914;p=jalview.git

diff --git a/examples/groovy/ComputePeptideVariants.groovy b/examples/groovy/ComputePeptideVariants.groovy
index 6caa69c..e5ece51 100644
--- a/examples/groovy/ComputePeptideVariants.groovy
+++ b/examples/groovy/ComputePeptideVariants.groovy
@@ -1,6 +1,6 @@
 import jalview.datamodel.SequenceFeature
 import jalview.gui.Desktop
-def af = jalview.bin.Jalview.currentAlignFrame
+def af = Jalview.getCurrentAlignFrame()
 def av = af.viewport
 def fr = Desktop.getAlignFrameFor(av.codingComplement).getFeatureRenderer()
 def counts = 0
@@ -29,4 +29,4 @@ for (seq in av.alignment.sequences)
 }
 af.getFeatureRenderer().featuresAdded()
 af.alignPanel.paintAlignment(true, true)
-println "Added " + countm + " missense and " + counts + " synonymous variants"
\ No newline at end of file
+println "Added " + countm + " missense and " + counts + " synonymous variants"