X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=examples%2Fgroovy%2Fparseproperties.groovy;fp=examples%2Fgroovy%2Fparseproperties.groovy;h=0000000000000000000000000000000000000000;hb=4f77328104498504339216829abf5ea87e2791ec;hp=879bd49b82ce3b160485a182a55b7d7e64a20e63;hpb=2b8c0785318a3528e1876e8e2dd48b7d831eae69;p=jalview.git diff --git a/examples/groovy/parseproperties.groovy b/examples/groovy/parseproperties.groovy deleted file mode 100644 index 879bd49..0000000 --- a/examples/groovy/parseproperties.groovy +++ /dev/null @@ -1,33 +0,0 @@ -/* - * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) - * Copyright (C) $$Year-Rel$$ The Jalview Authors - * - * This file is part of Jalview. - * - * Jalview is free software: you can redistribute it and/or - * modify it under the terms of the GNU General Public License - * as published by the Free Software Foundation, either version 3 - * of the License, or (at your option) any later version. - * - * Jalview is distributed in the hope that it will be useful, but - * WITHOUT ANY WARRANTY; without even the implied warranty - * of MERCHANTABILITY or FITNESS FOR A PARTICULAR - * PURPOSE. See the GNU General Public License for more details. - * - * You should have received a copy of the GNU General Public License - * along with Jalview. If not, see . - * The Jalview Authors are detailed in the 'AUTHORS' file. - */ -import jalview.analysis.*; -import jalview.datamodel.*; -import jalview.gui.AlignFrame; -import jalview.gui.AlignViewport; - -def af = Jalview.getAlignFrames(); -def al = af[0].viewport.alignment; -ParseProperties pp = new ParseProperties(al); -pp.getScoresFromDescription("Score", "ScanPS Raw Score", "([-0-9.+]+)"); -def sqs = al.getSequenceAt(0); -def annots = sqs.getAnnotation(); - -