Phyre 2 alignment of FER_CAPAN_1-144 with c2bs2E

X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=examples%2Ftestdata%2Fphyre2results%2F56da5616b4559c93%2Faligs%2Fc2bs2E_.61.alig.html;fp=examples%2Ftestdata%2Fphyre2results%2F56da5616b4559c93%2Faligs%2Fc2bs2E_.61.alig.html;h=b6231fc1636bb9483615e9cae193cbfd59f5e5d1;hb=42ca4613b0a07bab7c27a61b11acafdc9a3c27d1;hp=0000000000000000000000000000000000000000;hpb=f1ad88cc8d9b26244086e5c24b73fb80b0ff0a38;p=jalview.git diff --git a/examples/testdata/phyre2results/56da5616b4559c93/aligs/c2bs2E_.61.alig.html b/examples/testdata/phyre2results/56da5616b4559c93/aligs/c2bs2E_.61.alig.html new file mode 100644 index 0000000..b6231fc --- /dev/null +++ b/examples/testdata/phyre2results/56da5616b4559c93/aligs/c2bs2E_.61.alig.html @@ -0,0 +1,215 @@ + +Phyre 2 alignment of FER_CAPAN_1-144 with c2bs2E_ + + + + + + + + + + + +

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Job Description FER_CAPAN_1-144
Confidence 97.68% Date Wed Jan 4 12:02:18 GMT 2017
Rank 61 Aligned Residues 39
% Identity 26% Template c2bs2E_
PDB info PDB header:oxidoreductase Chain: E: PDB Molecule:quinol-fumarate reductase iron-sulfur subunit b; +PDBTitle: quinol:fumarate reductase from wolinella succinogenes +
Resolution 1.78 Å
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	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

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	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.							.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.
Query Sequence	P	I	E	F	D	C	P	D	N	V	Y	I	L	D	Q	A	E	E	.	.	.	.	.	.	A	G	H	D	L	P	Y	S	C	R	A	G	S	C	S	S	C	A	G	K	I
Query Conservation																			.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.
Template Conservation
Template Sequence	E	Y	K	I	E	E	A	P	S	M	T	I	F	I	V	L	N	M	I	R	E	T	Y	D	P	D	L	N	F	D	F	V	C	R	A	G	I	C	G	S	C	G	M	M	I
Template Known Secondary structure								T	T		B												T		T	T						S	S	S	S	S	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
	25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.