X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=examples%2Ftestdata%2Fphyre2results%2F56da5616b4559c93%2Faligs%2Fc3bl5E_.99.alig.html;fp=examples%2Ftestdata%2Fphyre2results%2F56da5616b4559c93%2Faligs%2Fc3bl5E_.99.alig.html;h=525e5f8b7f0823e8dc2b01c8dbd0d55da3d082e6;hb=42ca4613b0a07bab7c27a61b11acafdc9a3c27d1;hp=0000000000000000000000000000000000000000;hpb=f1ad88cc8d9b26244086e5c24b73fb80b0ff0a38;p=jalview.git diff --git a/examples/testdata/phyre2results/56da5616b4559c93/aligs/c3bl5E_.99.alig.html b/examples/testdata/phyre2results/56da5616b4559c93/aligs/c3bl5E_.99.alig.html new file mode 100644 index 0000000..525e5f8 --- /dev/null +++ b/examples/testdata/phyre2results/56da5616b4559c93/aligs/c3bl5E_.99.alig.html @@ -0,0 +1,224 @@ + +Phyre 2 alignment of FER_CAPAN_1-144 with c3bl5E_ + + + + + + + + + + +
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Job DescriptionFER_CAPAN_1-144
Confidence13.53%DateWed Jan 4 12:02:18 GMT 2017
Rank99Aligned Residues24
% Identity29%Templatec3bl5E_
PDB infoPDB header:hydrolaseChain: E: PDB Molecule:queuosine biosynthesis protein quec; +PDBTitle: crystal structure of quec from bacillus subtilis: an enzyme2 involved in preq1 biosynthesis +
Resolution2.95 Å
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  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment
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  71........80.........90....
Predicted Secondary structure 
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Query SS confidence 
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Query Sequence ILDQAEEAGHDLP.....YSCRAG....SCSSC
Query Conservation 
  
 
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Alig confidence 
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Template Conservation 
       
        
 
        
 
Template Sequence TWKLADELGALDFVKNNTLTCYNGIIADGCGEC
Template Known Secondary structure TT
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SSS
BTT
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Template Predicted Secondary structure 
Template SS confidence 
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Download:Text versionFASTA version

No model constructed - rank, confidence too low

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols +10, 845-858 (2015) + [paper] + [Citation + link]
 
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Lawrence +Kelley, Michael Sternberg 
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