X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=examples%2Ftestdata%2Fphyre2results%2F56da5616b4559c93%2Faligs%2Fc3lxfC_.33.alig.txt;fp=examples%2Ftestdata%2Fphyre2results%2F56da5616b4559c93%2Faligs%2Fc3lxfC_.33.alig.txt;h=b99cc59695d641bfd776c2bb1ea6e9b7bc29afe3;hb=42ca4613b0a07bab7c27a61b11acafdc9a3c27d1;hp=0000000000000000000000000000000000000000;hpb=f1ad88cc8d9b26244086e5c24b73fb80b0ff0a38;p=jalview.git

diff --git a/examples/testdata/phyre2results/56da5616b4559c93/aligs/c3lxfC_.33.alig.txt b/examples/testdata/phyre2results/56da5616b4559c93/aligs/c3lxfC_.33.alig.txt
new file mode 100644
index 0000000..b99cc59
--- /dev/null
+++ b/examples/testdata/phyre2results/56da5616b4559c93/aligs/c3lxfC_.33.alig.txt
@@ -0,0 +1,26 @@
+33 c3lxfC_ Probab=99.61   E-value=3.5e-15  Score=107.70  Aligned_columns=90  Identities=24%
+
+Q ss_pred             EEEEEECCC-EEEEEECCCCCHHHHHHHCCCC-CEECCCC-CCCCCCCEEEECCCCCCCC
+Q ss_conf             999992697-2999967998289999987897-0002337-8587671799414211566
+Q FER_CAPAN_1-14   51 KVKLITPDG-PIEFDCPDNVYILDQAEEAGHD-LPYSCRA-GSCSSCAGKIAGGAVDQTD  107 (144)
+Q Consensus        51 ~V~~~~~~g-~~~~~~~~~~tiLdaa~~aGi~-l~~sCr~-G~CgtC~~~v~~G~v~~~~  107 (144)
+                      +|+|+.++| .++|++++|++||++++++||+ +++.|.+ |.||+|+++|.+|..+...
+T Consensus         2 ~itvv~~dG~~~~i~~~~G~tLl~al~~~gi~~~~~~CgG~g~CgtC~V~v~~g~~~~l~   61 (104)
+T c3lxfC_           2 AILVTTRDGTRTEIQAEPGLSLMEALRDAGIDELLALCGGCCSCATCHVLVAPAFADRLP   61 (104)
+T ss_dssp             EEEEECTTSCEEEEECCTTSBHHHHHHHTTCTTCCCTTCSSSCCSTTEEEECGGGGGGSC
+T ss_pred             EEEEECCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCC
+T ss_conf             699984999899999479985789999779986655457840101279998238756777
+
+
+Q ss_pred             CCCCCHH-------HHCCCEEEEEEEEECC---CEEEEECCHH
+Q ss_conf             6668976-------8349759964324506---7699924845
+Q FER_CAPAN_1-14  108 GNFLDDD-------QLEEGWVLTCVAYPQS---DVTIETHKEA  140 (144)
+Q Consensus       108 ~~~l~~~-------~~~~g~vL~C~s~p~s---Dv~Ie~~~e~  140 (144)
+                      .....++       +...|++|+||.++..   |++|+.|.|+
+T Consensus        62 ~~~~~E~~~L~~~~~~~~~~RLaCQ~~v~~~~d~~~V~ip~~~  104 (104)
+T c3lxfC_          62 ALSGDENDLLDSSDHRTPHSRLSCQITINDKLEGLEVEIAPED  104 (104)
+T ss_dssp             CCCHHHHHHHHTCTTCCTTEEEGGGCBCCGGGTTEEEEECCCC
+T ss_pred             CCCHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCEEEEECCCC
+T ss_conf             9998899861010036887266987887777685799826999
+
+