X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=examples%2Ftestdata%2Fphyre2results%2F56da5616b4559c93%2Faligs%2Fc3p1mG_.40.alig.txt;fp=examples%2Ftestdata%2Fphyre2results%2F56da5616b4559c93%2Faligs%2Fc3p1mG_.40.alig.txt;h=52a953626e6997f7de101953da7d3a404aa4abfc;hb=42ca4613b0a07bab7c27a61b11acafdc9a3c27d1;hp=0000000000000000000000000000000000000000;hpb=f1ad88cc8d9b26244086e5c24b73fb80b0ff0a38;p=jalview.git

diff --git a/examples/testdata/phyre2results/56da5616b4559c93/aligs/c3p1mG_.40.alig.txt b/examples/testdata/phyre2results/56da5616b4559c93/aligs/c3p1mG_.40.alig.txt
new file mode 100644
index 0000000..52a9536
--- /dev/null
+++ b/examples/testdata/phyre2results/56da5616b4559c93/aligs/c3p1mG_.40.alig.txt
@@ -0,0 +1,26 @@
+40 c3p1mG_ Probab=99.54   E-value=1.2e-14  Score=104.66  Aligned_columns=91  Identities=20%
+
+Q ss_pred             EEEEEEEECCC-EEEEEECCCCCHHHHHHHCCCCCEEC--CCC-CCCCCCCEEEECCCCC
+Q ss_conf             08999992697-29999679982899999878970002--337-8587671799414211
+Q FER_CAPAN_1-14   49 SYKVKLITPDG-PIEFDCPDNVYILDQAEEAGHDLPYS--CRA-GSCSSCAGKIAGGAVD  104 (144)
+Q Consensus        49 ~~~V~~~~~~g-~~~~~~~~~~tiLdaa~~aGi~l~~s--Cr~-G~CgtC~~~v~~G~v~  104 (144)
+                      +.+|+|+.++| .++|+++.|++||++++++|+++++.  |.+ |.||+|+++|.+|.++
+T Consensus         3 ki~It~i~~dG~~~~i~~~~G~tLleaa~~~gi~i~~~~~CgG~~~CgtC~V~v~~g~~~   62 (128)
+T c3p1mG_           3 KITVHFINRDGETLTTKGKVGDSLLDVVVENNLDIDGFGACEGTLACSTCHLIFEDHIYE   62 (128)
+T ss_dssp             EEEEEEECTTSCEEEEEEETTCBHHHHHHHTTCSCTTTTTTCSSSCCSTTEEECCHHHHT
+T ss_pred             EEEEEEECCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCC
+T ss_conf             799999879997899994699877899997799868775537667655217998177504
+
+
+Q ss_pred             CCCCCCC-------CHHHHCCCEEEEEEEEECCCE---EEEECCH
+Q ss_conf             5666668-------976834975996432450676---9992484
+Q FER_CAPAN_1-14  105 QTDGNFL-------DDDQLEEGWVLTCVAYPQSDV---TIETHKE  139 (144)
+Q Consensus       105 ~~~~~~l-------~~~~~~~g~vL~C~s~p~sDv---~Ie~~~e  139 (144)
+                      .-....-       ...+..+|++|+||.+..+|+   +|++|++
+T Consensus        63 ~l~~~~~~E~~~L~~~~~~~~~~RLaCQ~~v~~~ldg~~V~iP~~  107 (128)
+T c3p1mG_          63 KLDAITDEENDMLDLAYGLTDRSRLGCQICLTKSMDNMTVRVPET  107 (128)
+T ss_dssp             TSCCCCHHHHHHHTTSTTCCTTEEETTTCBCCGGGTTEEEECCCC
+T ss_pred             CCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEECCHH
+T ss_conf             578998889987301104789727898999856668289981802
+
+