X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=examples%2Ftestdata%2Fphyre2results%2F56da5616b4559c93%2Faligs%2Fc3zyvA_.74.alig.html;fp=examples%2Ftestdata%2Fphyre2results%2F56da5616b4559c93%2Faligs%2Fc3zyvA_.74.alig.html;h=08c7ecb8faec2733a7f6adba27dcdd062ec62580;hb=207b06de28859536277608ad94897eaa526b1279;hp=0000000000000000000000000000000000000000;hpb=8537d486848be3e97578248dae6bede12e343fe1;p=jalview.git diff --git a/examples/testdata/phyre2results/56da5616b4559c93/aligs/c3zyvA_.74.alig.html b/examples/testdata/phyre2results/56da5616b4559c93/aligs/c3zyvA_.74.alig.html new file mode 100644 index 0000000..08c7ecb --- /dev/null +++ b/examples/testdata/phyre2results/56da5616b4559c93/aligs/c3zyvA_.74.alig.html @@ -0,0 +1,206 @@ + +Phyre 2 alignment of FER_CAPAN_1-144 with c3zyvA_ + + + + + + + + + + +
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Return to main resultsRetrieve Phyre Job Id +
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Job DescriptionFER_CAPAN_1-144
Confidence96.44%DateWed Jan 4 12:02:18 GMT 2017
Rank74Aligned Residues48
% Identity17%Templatec3zyvA_
PDB infoPDB header:oxidoreductaseChain: A: PDB Molecule:aox3; +PDBTitle: crystal structure of the mouse liver aldehyde oxidase 3 (maox3) +
Resolution2.54 Å
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  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment
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  51........60.........70.........80.........90........
Predicted Secondary structure 
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Query SS confidence 
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Query Sequence KVKLITPDGPIEFD.CPDNVYILDQAEE.AGHD.LPYSCRAGSCSSCAGKI
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Alig confidence 
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Template Conservation  
 
 
         
  
  
    
 
 
 
 
Template Sequence ELIFFVNGKKVTERNADPEVNLLFYLRKVIRLTGTKYGCGGGDCGACTVMI
Template Known Secondary structure 
TTSS
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BTT
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SSSSS
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Template Predicted Secondary structure 
Template SS confidence 
  910.........20.........30.........40.........50.........
 
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Download:Text versionFASTA version

No model constructed - rank, confidence too low

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Phyre is for non-commercial use only

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Commercial users please contact Michael Sternberg

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols +10, 845-858 (2015) + [paper] + [Citation + link]
 
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© Structural Bioinformatics Group, Imperial College, London
Lawrence +Kelley, Michael Sternberg 
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Phyre2 is part of Genome3D
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