X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=examples%2Ftestdata%2Fphyre2results%2F56da5616b4559c93%2Faligs%2Fc4itkA_.15.alig.txt;fp=examples%2Ftestdata%2Fphyre2results%2F56da5616b4559c93%2Faligs%2Fc4itkA_.15.alig.txt;h=a041f07ef80aefc84f50386c56b634471d06f4d4;hb=42ca4613b0a07bab7c27a61b11acafdc9a3c27d1;hp=0000000000000000000000000000000000000000;hpb=f1ad88cc8d9b26244086e5c24b73fb80b0ff0a38;p=jalview.git

diff --git a/examples/testdata/phyre2results/56da5616b4559c93/aligs/c4itkA_.15.alig.txt b/examples/testdata/phyre2results/56da5616b4559c93/aligs/c4itkA_.15.alig.txt
new file mode 100644
index 0000000..a041f07
--- /dev/null
+++ b/examples/testdata/phyre2results/56da5616b4559c93/aligs/c4itkA_.15.alig.txt
@@ -0,0 +1,26 @@
+15 c4itkA_ Probab=99.92   E-value=1.3e-24  Score=161.28  Aligned_columns=93  Identities=57%
+
+Q ss_pred             EEEEEEECCCEEEEEECCCCCHHHHHHHCCCCCEECCCCCCCCCCCEEEECCCCCCCCCC
+Q ss_conf             899999269729999679982899999878970002337858767179941421156666
+Q FER_CAPAN_1-14   50 YKVKLITPDGPIEFDCPDNVYILDQAEEAGHDLPYSCRAGSCSSCAGKIAGGAVDQTDGN  109 (144)
+Q Consensus        50 ~~V~~~~~~g~~~~~~~~~~tiLdaa~~aGi~l~~sCr~G~CgtC~~~v~~G~v~~~~~~  109 (144)
+                      |+|+|+.+++.++|++++|++|||+++++|++++|+|++|.||+|+++|++|++++.+..
+T Consensus         2 ~~Iti~~~~~~~~v~~~~g~tLL~a~~~~gi~i~~~C~~G~CgtC~v~v~~G~~~~~~~~   61 (104)
+T c4itkA_           2 FKVTFKTPKGEKTIDVEADKYLLDAAEEAGMDLPYSCRSGGCSTCCGKLESGTVDQSDQN   61 (104)
+T ss_dssp             EEEEEEETTEEEEEEECTTSCHHHHHHHTTCCCCCSSSSSSSSTTEEEEEECCEECTTCC
+T ss_pred             CEEEEEECCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC
+T ss_conf             189999689829999789870899998456742111236877653399983233752111
+
+
+Q ss_pred             CCCHHHHCCCEEEEEEEEECCCEEEEECCHHHH
+Q ss_conf             689768349759964324506769992484540
+Q FER_CAPAN_1-14  110 FLDDDQLEEGWVLTCVAYPQSDVTIETHKEAEL  142 (144)
+Q Consensus       110 ~l~~~~~~~g~vL~C~s~p~sDv~Ie~~~e~el  142 (144)
+                      .+++++..+|++|+|+++|.+|++|+++.++++
+T Consensus        62 ~l~~~~~~~g~rLaCq~~~~~Di~I~~~~~~~~   94 (104)
+T c4itkA_          62 MLDEDQLKQGFVLTCVAYPTSDIVILTDQESKL   94 (104)
+T ss_dssp             SCCHHHHHTTEEEGGGCEESSCEEEECSCGGGS
+T ss_pred             CCCHHHCCCCEEEEEEEEECCCEEEEECCHHHC
+T ss_conf             221122149769975425618879993771226
+
+