Phyre 2 alignment of FER_CAPAN_1-144 with c4uhxA

X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=examples%2Ftestdata%2Fphyre2results%2F56da5616b4559c93%2Faligs%2Fc4uhxA_.75.alig.html;fp=examples%2Ftestdata%2Fphyre2results%2F56da5616b4559c93%2Faligs%2Fc4uhxA_.75.alig.html;h=39d4956219c688860763fd754fc90a04f63f639c;hb=42ca4613b0a07bab7c27a61b11acafdc9a3c27d1;hp=0000000000000000000000000000000000000000;hpb=f1ad88cc8d9b26244086e5c24b73fb80b0ff0a38;p=jalview.git diff --git a/examples/testdata/phyre2results/56da5616b4559c93/aligs/c4uhxA_.75.alig.html b/examples/testdata/phyre2results/56da5616b4559c93/aligs/c4uhxA_.75.alig.html new file mode 100644 index 0000000..39d4956 --- /dev/null +++ b/examples/testdata/phyre2results/56da5616b4559c93/aligs/c4uhxA_.75.alig.html @@ -0,0 +1,206 @@ + +Phyre 2 alignment of FER_CAPAN_1-144 with c4uhxA_ + + + + + + + + + + + +

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Job Description FER_CAPAN_1-144
Confidence 96.42% Date Wed Jan 4 12:02:18 GMT 2017
Rank 75 Aligned Residues 48
% Identity 15% Template c4uhxA_
PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:aldehyde oxidase; +PDBTitle: human aldehyde oxidase in complex with phthalazine and thioridazine +
Resolution 2.70 Å
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	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

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	51	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure															.															.				.
Query SS confidence															.															.				.
Query Sequence	K	V	K	L	I	T	P	D	G	P	I	E	F	D	.	C	P	D	N	V	Y	I	L	D	Q	A	E	E	A	.	G	H	D	.	L	P	Y	S	C	R	A	G	S	C	S	S	C	A	G	K	I
Query Conservation															.															.				.
Alig confidence															.															.				.
Template Conservation
Template Sequence	E	L	L	F	Y	V	N	G	R	K	V	I	E	K	N	V	D	P	E	T	M	L	L	P	Y	L	R	K	K	L	R	L	T	G	T	K	Y	G	C	G	G	G	G	C	G	A	C	T	V	M	I
Template Known Secondary structure							T	T							S			T	T		B								T	S			T	T	S			S		S	S	S	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
	6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.