X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=examples%2Ftestdata%2Fphyre2results%2F56da5616b4559c93%2Faligs%2Fd1e9ma_.32.alig.txt;fp=examples%2Ftestdata%2Fphyre2results%2F56da5616b4559c93%2Faligs%2Fd1e9ma_.32.alig.txt;h=b35cbcb55a85a99f334a38b538c0a1338629c21c;hb=42ca4613b0a07bab7c27a61b11acafdc9a3c27d1;hp=0000000000000000000000000000000000000000;hpb=f1ad88cc8d9b26244086e5c24b73fb80b0ff0a38;p=jalview.git

diff --git a/examples/testdata/phyre2results/56da5616b4559c93/aligs/d1e9ma_.32.alig.txt b/examples/testdata/phyre2results/56da5616b4559c93/aligs/d1e9ma_.32.alig.txt
new file mode 100644
index 0000000..b35cbcb
--- /dev/null
+++ b/examples/testdata/phyre2results/56da5616b4559c93/aligs/d1e9ma_.32.alig.txt
@@ -0,0 +1,26 @@
+32 d1e9ma_ Probab=99.62   E-value=1.4e-15  Score=109.94  Aligned_columns=91  Identities=20%
+
+Q ss_pred             EEEEEEECCC-EEEEEECCCCCHHHHHHHCCCC-CEECCCC-CCCCCCCEEEECCCCCCC
+Q ss_conf             8999992697-2999967998289999987897-0002337-858767179941421156
+Q FER_CAPAN_1-14   50 YKVKLITPDG-PIEFDCPDNVYILDQAEEAGHD-LPYSCRA-GSCSSCAGKIAGGAVDQT  106 (144)
+Q Consensus        50 ~~V~~~~~~g-~~~~~~~~~~tiLdaa~~aGi~-l~~sCr~-G~CgtC~~~v~~G~v~~~  106 (144)
+                      .+|+|+.++| .++|++++|++|||+++++|++ +++.|++ |.||+|+++|.+|.++..
+T Consensus         1 akvt~i~~~G~~~~i~~~~G~tLl~al~~~gi~~~~~~CgG~~~CgtC~V~v~~g~~~~l   60 (106)
+T d1e9ma_           1 AKIIFIEHNGTRHEVEAKPGLTVMEAARDNGVPGIDADCGGACACSTCHAYVDPAWVDKL   60 (106)
+T ss_dssp             CEEEEECTTSCEEEEECCTTSBHHHHHHTTTCTTCCCTTSSSSSSCTTEEEECHHHHTTS
+T ss_pred             CEEEEECCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
+T ss_conf             969998499988999947998678999987898465567886603413899807873667
+
+
+Q ss_pred             CCC--------CCCHHHHCCCEEEEEEEEECCC---EEEEECCHH
+Q ss_conf             666--------6897683497599643245067---699924845
+Q FER_CAPAN_1-14  107 DGN--------FLDDDQLEEGWVLTCVAYPQSD---VTIETHKEA  140 (144)
+Q Consensus       107 ~~~--------~l~~~~~~~g~vL~C~s~p~sD---v~Ie~~~e~  140 (144)
+                      ...        .+..+...+|++|+||.++..|   ++|++|+++
+T Consensus        61 ~~~~~~E~~~L~~~~~~~~~~~RLaCQ~~v~~~~d~~~V~iP~~~  105 (106)
+T d1e9ma_          61 PKALPTETDMIDFAYEPNPATSRLTCQIKVTSLLDGLVVHLPEKQ  105 (106)
+T ss_dssp             CCCCHHHHHHHTTSSSCCTTTEEEGGGCBCCGGGTTEEEECCSCC
+T ss_pred             CCCCHHHHHHHCCCCHHCCCCEEEEEEEEECCCCCCEEEECCCCC
+T ss_conf             899888998604470113577366887897776683799828654
+
+