X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=examples%2Ftestdata%2Fphyre2results%2F56da5616b4559c93%2Faligs%2Fd1krha3.17.alig.txt;fp=examples%2Ftestdata%2Fphyre2results%2F56da5616b4559c93%2Faligs%2Fd1krha3.17.alig.txt;h=3bb5be99513e794c53d0a4d106b44f4670574d78;hb=42ca4613b0a07bab7c27a61b11acafdc9a3c27d1;hp=0000000000000000000000000000000000000000;hpb=f1ad88cc8d9b26244086e5c24b73fb80b0ff0a38;p=jalview.git

diff --git a/examples/testdata/phyre2results/56da5616b4559c93/aligs/d1krha3.17.alig.txt b/examples/testdata/phyre2results/56da5616b4559c93/aligs/d1krha3.17.alig.txt
new file mode 100644
index 0000000..3bb5be9
--- /dev/null
+++ b/examples/testdata/phyre2results/56da5616b4559c93/aligs/d1krha3.17.alig.txt
@@ -0,0 +1,26 @@
+17 d1krha3 Probab=99.90   E-value=2.3e-23  Score=154.26  Aligned_columns=96  Identities=24%
+
+Q ss_pred             CEEEEEEEECCC-EEEEEECCCCCHHHHHHHCCCCCEECCCCCCCCCCCEEEECCCCCCC
+Q ss_conf             408999992697-29999679982899999878970002337858767179941421156
+Q FER_CAPAN_1-14   48 ASYKVKLITPDG-PIEFDCPDNVYILDQAEEAGHDLPYSCRAGSCSSCAGKIAGGAVDQT  106 (144)
+Q Consensus        48 ~~~~V~~~~~~g-~~~~~~~~~~tiLdaa~~aGi~l~~sCr~G~CgtC~~~v~~G~v~~~  106 (144)
+                      ..|+|+|.+++| ..+|++++|++|||+++++|++++|.|++|.||+|+++|++|++...
+T Consensus         1 ~~~kVtv~~~dg~~~~i~~~~g~tLl~a~~~~Gi~l~~~C~~G~CgtC~v~v~~G~~~~~   60 (104)
+T d1krha3           1 SNHQVALQFEDGVTRFICIAQGETLSDAAYRQQINIPMDCREGECGTCRAFCESGNYDMP   60 (104)
+T ss_dssp             CCEEEEEECTTSCEEEEEECTTCCHHHHHHHTTCCCSCSCSSSSSCTTEEEEEECCEECC
+T ss_pred             CCEEEEEEECCCCEEEEEECCCCCHHHHHHHCCCCCHHHCCCCCCCCCEEEEEECEECCC
+T ss_conf             950899993899669999489982889999879996011016866645089984611376
+
+
+Q ss_pred             CC----CCCCHHHHCCCEEEEEEEEECCCEEEEECCHHHHC
+Q ss_conf             66----66897683497599643245067699924845406
+Q FER_CAPAN_1-14  107 DG----NFLDDDQLEEGWVLTCVAYPQSDVTIETHKEAELV  143 (144)
+Q Consensus       107 ~~----~~l~~~~~~~g~vL~C~s~p~sDv~Ie~~~e~el~  143 (144)
+                      ..    ..++++++.+||+|+|+++|.+|++|++++++++.
+T Consensus        61 ~~~~~~~~~~~~~~~~g~rLaCq~~~~~d~~i~ip~~~~~~  101 (104)
+T d1krha3          61 EDNYIEDALTPEEAQQGYVLACQCRPTSDAVFQIQASSEVC  101 (104)
+T ss_dssp             GGGSCTTTCCHHHHHHTEEETTTCEESSSEEEEESSCTTGG
+T ss_pred             CCCHHHHCCCHHHCCCCEEEEEEEEECCCEEEEECCHHHHH
+T ss_conf             74101102887771798498545276198799957735631
+
+