X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=examples%2Ftestdata%2Fphyre2results%2F56da5616b4559c93%2Faligs%2Fd1l5pa_.38.alig.txt;fp=examples%2Ftestdata%2Fphyre2results%2F56da5616b4559c93%2Faligs%2Fd1l5pa_.38.alig.txt;h=0981fa0d0fcb6d21fb189c1369ea1b037015a7e8;hb=42ca4613b0a07bab7c27a61b11acafdc9a3c27d1;hp=0000000000000000000000000000000000000000;hpb=f1ad88cc8d9b26244086e5c24b73fb80b0ff0a38;p=jalview.git

diff --git a/examples/testdata/phyre2results/56da5616b4559c93/aligs/d1l5pa_.38.alig.txt b/examples/testdata/phyre2results/56da5616b4559c93/aligs/d1l5pa_.38.alig.txt
new file mode 100644
index 0000000..0981fa0
--- /dev/null
+++ b/examples/testdata/phyre2results/56da5616b4559c93/aligs/d1l5pa_.38.alig.txt
@@ -0,0 +1,26 @@
+38 d1l5pa_ Probab=99.56   E-value=5.3e-15  Score=106.63  Aligned_columns=86  Identities=16%
+
+Q ss_pred             EEEEEECCCEEEEEECCCCCHHHHHHHCCC-CCEECC-CCCCCCCCCEEEECCCCCCCCC
+Q ss_conf             999992697299996799828999998789-700023-3785876717994142115666
+Q FER_CAPAN_1-14   51 KVKLITPDGPIEFDCPDNVYILDQAEEAGH-DLPYSC-RAGSCSSCAGKIAGGAVDQTDG  108 (144)
+Q Consensus        51 ~V~~~~~~g~~~~~~~~~~tiLdaa~~aGi-~l~~sC-r~G~CgtC~~~v~~G~v~~~~~  108 (144)
+                      +|||...+...+|++++|++|||+++++|+ ++++.| +.|.||+|++++.+|.+.....
+T Consensus         2 tiT~~~~G~~~~i~~~~G~tLl~~l~~~gi~~~~~~CgG~g~CgtC~v~v~~g~~~~~~~   61 (93)
+T d1l5pa_           2 TITAVKGGVKKQLKFEDDQTLFTVLTEAGLMSADDTCQGNKACGKCICKHVSGKVAAAED   61 (93)
+T ss_dssp             EEEEEETTEEEEEECCTTEEHHHHHHTTTSSCCTTSCSSSSSSCCCEEEEEESCCCCCCH
+T ss_pred             EEEEEECCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCH
+T ss_conf             599984994999993699877899996599876568888761100189994288999896
+
+
+Q ss_pred             CCCC-HHHHCCCEEEEEEEEECCC---EEEEE
+Q ss_conf             6689-7683497599643245067---69992
+Q FER_CAPAN_1-14  109 NFLD-DDQLEEGWVLTCVAYPQSD---VTIET  136 (144)
+Q Consensus       109 ~~l~-~~~~~~g~vL~C~s~p~sD---v~Ie~  136 (144)
+                      ..+. .+++.++++|+||.+..+|   ++|++
+T Consensus        62 ~~~~~~~~~~~~~RLaCQv~~~~d~dg~~v~i   93 (93)
+T d1l5pa_          62 DEKEFLEDQPANARLACAITLSGENDGAVFEL   93 (93)
+T ss_dssp             HHHHHHTTSCTTEEEGGGCEECGGGTTCEEEC
+T ss_pred             HHHHHHCCCCCCEEEEEEEEECCCCCCEEEEC
+T ss_conf             78785166888717799889766547649979
+
+