X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=examples%2Ftestdata%2Fphyre2results%2F56da5616b4559c93%2Fsummary.html;fp=examples%2Ftestdata%2Fphyre2results%2F56da5616b4559c93%2Fsummary.html;h=f42a8bddbe52aa228c57e627fd5e503662e664f0;hb=42ca4613b0a07bab7c27a61b11acafdc9a3c27d1;hp=0000000000000000000000000000000000000000;hpb=f1ad88cc8d9b26244086e5c24b73fb80b0ff0a38;p=jalview.git diff --git a/examples/testdata/phyre2results/56da5616b4559c93/summary.html b/examples/testdata/phyre2results/56da5616b4559c93/summary.html new file mode 100644 index 0000000..f42a8bd --- /dev/null +++ b/examples/testdata/phyre2results/56da5616b4559c93/summary.html @@ -0,0 +1,2485 @@ +Phyre 2 Results for FER_CAPAN_1-144 + + + + + + + + + + + + + + + + + + + + + + + + + + + +
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Phyre HomeRetrieve Phyre Job Id +
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Emailtcnofoegbu@dundee.ac.uk
DescriptionFER_CAPAN_1-144
DateWed Jan 4 12:02:18 GMT 2017
Unique Job ID56da5616b4559c93
SequenceMASVSATMIS ... Download FASTA
Job Typenormal
Job Expiry
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Summary 

+
Top model
+ + + + +
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:32.887 Y:28.173 Z:33.551 +
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Model (left) based on template c4n58A_
Top template information
PDB header:hydrolase
Chain: A: PDB Molecule:pectocin m2;
+PDBTitle: crystal structure of pectocin m2 at 1.86 angstroms +
Confidence and coverage
+ +
Confidence:100.0%Coverage: 65%
93 residues ( 65% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
128 residues ( 89%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
3D viewing
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Sequence analysis 

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+		Download FASTA version
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Secondary structure and disorder prediction [Show] 

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Domain analysis [Show] 

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Detailed template information [Hide] 

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#
TemplateAlignment Coverage3D ModelConfidence
% i.d.Template Information
+
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
1c4n58A_
 + + + +
100.054 +
PDB header:hydrolase
Chain: A: PDB Molecule:pectocin m2;
+PDBTitle: crystal structure of pectocin m2 at 1.86 angstroms +
+
2 +d1a70a_
+ +		 + +
100.071 + +
+
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin-related
+
3d1offa_
 + + + +
100.073 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin-related
+
4d1frra_
 + + + +
99.962 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin-related
+
5d1pfda_
 + + + +
99.970 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin-related
+
6d1frda_
 + + + +
99.950 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin-related
+
7d1fxia_
 + + + +
99.962 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin-related
+
8d1gaqb_
 + + + +
99.971 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin-related
+
9d1iuea_
 + + + +
99.948 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin-related
+
10d1awda_
 + + + +
99.968 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin-related
+
11d1wria_
 + + + +
99.959 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin-related
+
12d1czpa_
 + + + +
99.964 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin-related
+
13d2cjoa_
 + + + +
99.963 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin-related
+
14d4fxca_
 + + + +
99.964 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin-related
+
15c4itkA_
 + + + +
99.957 +
PDB header:electron transport
Chain: A: PDB Molecule:apoferredoxin;
+PDBTitle: the structure of c.reinhardtii ferredoxin 2 +
+
16c1krhA_
 + + + +
99.925 +
PDB header:oxidoreductase
Chain: A: PDB Molecule:benzoate 1,2-dioxygenase reductase;
+PDBTitle: x-ray stucture of benzoate dioxygenase reductase +
+
17d1krha3
 + + + +
99.924 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin domains from multidomain proteins
+
18d1jq4a_
 + + + +
99.929 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin domains from multidomain proteins
+
19c4wqmA_
 + + + +
99.928 +
PDB header:oxidoreductase
Chain: A: PDB Molecule:toluene-4-monooxygenase electron transfer component;
+PDBTitle: structure of the toluene 4-monooxygenase nadh oxidoreductase t4mof,2 k270s k271s variant +
+
20c2piaA_
 + + + +
99.922 +
PDB header:reductase
Chain: A: PDB Molecule:phthalate dioxygenase reductase;
+PDBTitle: phthalate dioxygenase reductase: a modular structure for2 electron transfer from pyridine nucleotides to [2fe-2s] +
+
21d2piaa3 + + + +
not modelled99.925 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin domains from multidomain proteins
22d1doia_ + + + +
not modelled99.934 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin-related
23d1e0za_ + + + +
not modelled99.834 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin-related
24c4p6vF_ + + + +
not modelled99.822 +
PDB header:oxidoreductase
Chain: F: PDB Molecule:na(+)-translocating nadh-quinone reductase subunit f;
+PDBTitle: crystal structure of the na+-translocating nadh: ubiquinone2 oxidoreductase from vibrio cholerae +
25c3zyyX_ + + + +
not modelled99.829 +
PDB header:iron-sulfur-binding protein
Chain: X: PDB Molecule:iron-sulfur cluster binding protein;
+PDBTitle: reductive activator for corrinoid,iron-sulfur protein +
26c5frtC_ + + + +
not modelled99.826 +
PDB header:oxidoreductase
Chain: C: PDB Molecule:dimeric (2fe-2s) protein;
+PDBTitle: structure of the fesii (shethna) protein of azotobacter vinelandii +
27c3ah7A_ + + + +
not modelled99.722 +
PDB header:metal binding protein
Chain: A: PDB Molecule:[2fe-2s]ferredoxin;
+PDBTitle: crystal structure of the isc-like [2fe-2s] ferredoxin (fdxb) from2 pseudomonas putida jcm 20004 +
28c2y5cB_ + + + +
not modelled99.720 +
PDB header:electron transport
Chain: B: PDB Molecule:adrenodoxin-like protein, mitochondrial;
+PDBTitle: structure of human ferredoxin 2 (fdx2)in complex with 2fe2s2 cluster +
29c2mjdA_ + + + +
not modelled99.725 +
PDB header:metal binding protein
Chain: A: PDB Molecule:adrenodoxin homolog, mitochondrial;
+PDBTitle: oxidized yeast adrenodoxin homolog 1 +
30c2wlbB_ + + + +
not modelled99.728 +
PDB header:electron transport
Chain: B: PDB Molecule:electron transfer protein 1, mitochondrial;
+PDBTitle: adrenodoxin-like ferredoxin etp1fd(516-618) of2 schizosaccharomyces pombe mitochondria +
31d1i7ha_ + + + +
not modelled99.627 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin-related
32d1e9ma_ + + + +
not modelled99.620 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin-related
33c3lxfC_ + + + +
not modelled99.624 +
PDB header:metal binding protein
Chain: C: PDB Molecule:ferredoxin;
+PDBTitle: crystal structure of [2fe-2s] ferredoxin arx from novosphingobium2 aromaticivorans +
34c2mj3A_ + + + +
not modelled99.621 +
PDB header:metal binding protein
Chain: A: PDB Molecule:iron-sulfur cluster binding protein;
+PDBTitle: backbone 1h, 13c, and 15n chemical shift assignments and structure of2 iron-sulfur cluster binding protein from ehrlichia chaffeensis +
35d1xlqa1 + + + +
not modelled99.624 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin-related
36c4ltuB_ + + + +
not modelled99.619 +
PDB header:electron transport
Chain: B: PDB Molecule:ferredoxin;
+PDBTitle: crystal structure of ferredoxin from rhodopseudomonas palustris haa2 +
37d2bt6a1 + + + +
not modelled99.619 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin-related
38d1l5pa_ + + + +
not modelled99.616 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin-related
39c3huiA_ + + + +
not modelled99.614 +
PDB header:electron transport
Chain: A: PDB Molecule:ferredoxin;
+PDBTitle: crystal structure of the mutant a105r of [2fe-2s] ferredoxin in the2 class i cyp199a2 system from rhodopseudomonas palustris +
40c3p1mG_ + + + +
not modelled99.520 +
PDB header:electron transport
Chain: G: PDB Molecule:adrenodoxin, mitochondrial;
+PDBTitle: crystal structure of human ferredoxin-1 (fdx1) in complex with iron-2 sulfur cluster +
41d1b9ra_ + + + +
not modelled99.522 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin-related
42c1l6vA_ + + + +
not modelled99.219 +
PDB header:electron transport
Chain: A: PDB Molecule:adrenodoxin 1;
+PDBTitle: structure of reduced bovine adrenodoxin +
43d2fug33 + + + +
not modelled98.923 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin domains from multidomain proteins
44d3c8ya2 + + + +
not modelled98.726 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin domains from multidomain proteins
45c1c4cA_ + + + +
not modelled98.626 +
PDB header:oxidoreductase
Chain: A: PDB Molecule:protein (fe-only hydrogenase);
+PDBTitle: binding of exogenously added carbon monoxide at the active2 site of the fe-only hydrogenase (cpi) from clostridium3 pasteurianum +
46c2fugC_ + + + +
not modelled98.325 +
PDB header:oxidoreductase
Chain: C: PDB Molecule:nadh-quinone oxidoreductase chain 3;
+PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus +
47d1t3qa2 + + + +
not modelled98.323 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin domains from multidomain proteins
48d1n62a2 + + + +
not modelled98.214 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin domains from multidomain proteins
49d1vlba2 + + + +
not modelled98.213 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin domains from multidomain proteins
50d1ffva2 + + + +
not modelled98.112 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin domains from multidomain proteins
51d1dgja2 + + + +
not modelled98.117 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin domains from multidomain proteins
52c3hrdH_ + + + +
not modelled98.021 +
PDB header:oxidoreductase
Chain: H: PDB Molecule:nicotinate dehydrogenase small fes subunit;
+PDBTitle: crystal structure of nicotinate dehydrogenase +
53c1t3qD_ + + + +
not modelled98.023 +
PDB header:oxidoreductase
Chain: D: PDB Molecule:quinoline 2-oxidoreductase small subunit;
+PDBTitle: crystal structure of quinoline 2-oxidoreductase from pseudomonas2 putida 86 +
54d1rm6c2 + + + +
not modelled98.024 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin domains from multidomain proteins
55c1rm6F_ + + + +
not modelled97.927 +
PDB header:oxidoreductase
Chain: F: PDB Molecule:4-hydroxybenzoyl-coa reductase gamma subunit;
+PDBTitle: structure of 4-hydroxybenzoyl-coa reductase from thauera2 aromatica +
56c4zohC_ + + + +
not modelled97.917 +
PDB header:oxidoreductase
Chain: C: PDB Molecule:putative oxidoreductase iron-sulfur subunit;
+PDBTitle: crystal structure of glyceraldehyde oxidoreductase +
57c1n60D_ + + + +
not modelled97.914 +
PDB header:oxidoreductase
Chain: D: PDB Molecule:carbon monoxide dehydrogenase small chain;
+PDBTitle: crystal structure of the cu,mo-co dehydrogenase (codh); cyanide-2 inactivated form +
58d2bs2b2 + + + +
not modelled97.826 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin domains from multidomain proteins
59c1ffuA_ + + + +
not modelled97.813 +
PDB header:hydrolase
Chain: A: PDB Molecule:cuts, iron-sulfur protein of carbon monoxide
+PDBTitle: carbon monoxide dehydrogenase from hydrogenophaga2 pseudoflava which lacks the mo-pyranopterin moiety of the3 molybdenum cofactor +
60d1kf6b2 + + + +
not modelled97.723 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin domains from multidomain proteins
61c2bs2E_ + + + +
not modelled97.726 +
PDB header:oxidoreductase
Chain: E: PDB Molecule:quinol-fumarate reductase iron-sulfur subunit b;
+PDBTitle: quinol:fumarate reductase from wolinella succinogenes +
62c2h89B_ + + + +
not modelled97.533 +
PDB header:oxidoreductase
Chain: B: PDB Molecule:succinate dehydrogenase ip subunit;
+PDBTitle: avian respiratory complex ii with malonate bound +
63c2b76N_ + + + +
not modelled97.528 +
PDB header:oxidoreductase
Chain: N: PDB Molecule:fumarate reductase iron-sulfur protein;
+PDBTitle: e. coli quinol fumarate reductase frda e49q mutation +
64d1jroa2 + + + +
not modelled97.415 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin domains from multidomain proteins
65c2w3rG_ + + + +
not modelled97.315 +
PDB header:oxidoreductase
Chain: G: PDB Molecule:xanthine dehydrogenase;
+PDBTitle: crystal structure of xanthine dehydrogenase (desulfo form)2 from rhodobacter capsulatus in complex with hypoxanthine +
66c3vrbF_ + + + +
not modelled97.331 +
PDB header:oxidoreductase/oxidoreductase inhibitor
Chain: F: PDB Molecule:iron-sulfur subunit of succinate dehydrogenase;
+PDBTitle: mitochondrial rhodoquinol-fumarate reductase from the parasitic2 nematode ascaris suum with the specific inhibitor flutolanil and3 substrate fumarate +
67d1v97a2 + + + +
not modelled97.313 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin domains from multidomain proteins
68d1nekb2 + + + +
not modelled97.323 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:2Fe-2S ferredoxin-like
Family:2Fe-2S ferredoxin domains from multidomain proteins
69c1nekB_ + + + +
not modelled97.126 +
PDB header:oxidoreductase/electron transport
Chain: B: PDB Molecule:succinate dehydrogenase iron-sulfur protein;
+PDBTitle: complex ii (succinate dehydrogenase) from e. coli with2 ubiquinone bound +
70c3b9jI_ + + + +
not modelled97.113 +
PDB header:oxidoreductase
Chain: I: PDB Molecule:xanthine oxidase;
+PDBTitle: structure of xanthine oxidase with 2-hydroxy-6-methylpurine +
71c1vlbA_ + + + +
not modelled97.113 +
PDB header:oxidoreductase
Chain: A: PDB Molecule:aldehyde oxidoreductase;
+PDBTitle: structure refinement of the aldehyde oxidoreductase from2 desulfovibrio gigas at 1.28 a +
72c3eubJ_ + + + +
not modelled97.013 +
PDB header:oxidoreductase
Chain: J: PDB Molecule:xanthine dehydrogenase/oxidase;
+PDBTitle: crystal structure of desulfo-xanthine oxidase with xanthine +
73c1dgjA_ + + + +
not modelled96.517 +
PDB header:oxidoreductase
Chain: A: PDB Molecule:aldehyde oxidoreductase;
+PDBTitle: crystal structure of the aldehyde oxidoreductase from2 desulfovibrio desulfuricans atcc 27774 +
74c3zyvA_ + + + +
not modelled96.417 +
PDB header:oxidoreductase
Chain: A: PDB Molecule:aox3;
+PDBTitle: crystal structure of the mouse liver aldehyde oxidase 3 (maox3) +
75c4uhxA_ + + + +
not modelled96.415 +
PDB header:oxidoreductase
Chain: A: PDB Molecule:aldehyde oxidase;
+PDBTitle: human aldehyde oxidase in complex with phthalazine and thioridazine +
76c1wygA_ + + + +
not modelled95.615 +
PDB header:oxidoreductase
Chain: A: PDB Molecule:xanthine dehydrogenase/oxidase;
+PDBTitle: crystal structure of a rat xanthine dehydrogenase triple mutant2 (c535a, c992r and c1324s) +
77c1ep3B_ + + + +
not modelled95.415 +
PDB header:oxidoreductase
Chain: B: PDB Molecule:dihydroorotate dehydrogenase b (pyrk subunit);
+PDBTitle: crystal structure of lactococcus lactis dihydroorotate dehydrogenase2 b. data collected under cryogenic conditions. +
78d1ep3b2 + + + +
not modelled93.815 +
Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain
Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain
Family:Dihydroorotate dehydrogenase B, PyrK subunit
79c4ylfA_ + + + +
not modelled93.326 +
PDB header:oxidoreductase
Chain: A: PDB Molecule:dihydroorotate dehydrogenase b (nad(+)), electron transfer
+PDBTitle: insights into flavin-based electron bifurcation via the nadh-dependent2 reduced ferredoxin-nadp oxidoreductase structure +
80c1x31A_ + + + +
not modelled53.69 +
PDB header:oxidoreductase
Chain: A: PDB Molecule:sarcosine oxidase alpha subunit;
+PDBTitle: crystal structure of heterotetrameric sarcosine oxidase from2 corynebacterium sp. u-96 +
81d2hj1a1 + + + +
not modelled50.010 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:MoaD/ThiS
Family:HI0395-like
82c2hj1A_ + + + +
not modelled50.010 +
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein;
+PDBTitle: crystal structure of a 3d domain-swapped dimer of protein hi0395 from2 haemophilus influenzae +
83c2kmmA_ + + + +
not modelled44.831 +
PDB header:hydrolase
Chain: A: PDB Molecule:guanosine-3',5'-bis(diphosphate) 3'-
+PDBTitle: solution nmr structure of the tgs domain of pg1808 from2 porphyromonas gingivalis. northeast structural genomics3 consortium target pgr122a (418-481) +
84d1wx8a1 + + + +
not modelled36.221 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
85c3hvzB_ + + + +
not modelled35.420 +
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
+PDBTitle: crystal structure of the tgs domain of the clolep_03100 protein from2 clostridium leptum, northeast structural genomics consortium target3 qlr13a +
86d1tkea1 + + + +
not modelled29.826 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:TGS-like
Family:TGS domain
87d1j8ca_ + + + +
not modelled24.219 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
88d1wxma1 + + + +
not modelled22.519 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ras-binding domain, RBD
89d2al3a1 + + + +
not modelled22.319 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:UBX domain
90d2bwfa1 + + + +
not modelled18.712 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
91c1feoA_ + + + +
not modelled17.463 +
PDB header:toxin
Chain: A: PDB Molecule:omega-conotoxin mviia-gly;
+PDBTitle: solution structure of omega-conotoxin mviia with c-terminal2 gly +
92c1wwtA_ + + + +
not modelled16.617 +
PDB header:ligase
Chain: A: PDB Molecule:threonyl-trna synthetase, cytoplasmic;
+PDBTitle: solution structure of the tgs domain from human threonyl-2 trna synthetase +
93d1nyra2 + + + +
not modelled15.618 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:TGS-like
Family:TGS domain
94d2vv5a2 + + + +
not modelled15.336 +
Fold:Ferredoxin-like
Superfamily:Mechanosensitive channel protein MscS (YggB), C-terminal domain
Family:Mechanosensitive channel protein MscS (YggB), C-terminal domain
95c2kanA_ + + + +
not modelled14.28 +
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein ar3433a;
+PDBTitle: solution nmr structure of ubiquitin-like domain of2 arabidopsis thaliana protein at2g32350. northeast3 structural genomics consortium target ar3433a +
96c3j60I_ + + + +
not modelled14.026 +
PDB header:ribosome
Chain: I: PDB Molecule:40s ribosomal protein s8e;
+PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome +
97d2znvb1 + + + +
not modelled13.917 +
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
98d1rutx4 + + + +
not modelled13.831 +
Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
99c3bl5E_ + + + +
not modelled13.529 +
PDB header:hydrolase
Chain: E: PDB Molecule:queuosine biosynthesis protein quec;
+PDBTitle: crystal structure of quec from bacillus subtilis: an enzyme2 involved in preq1 biosynthesis +
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Binding site prediction 

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The top ranking model of your protein (c4n58A_ 100.0% confidence) has been submitted to the 3DLigandSite server to predict potential binding sites.

Results will appear here when complete

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