X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhelp%2Fhtml%2FcolourSchemes%2Fgecos-ocean.html;fp=help%2Fhelp%2Fhtml%2FcolourSchemes%2Fgecos-ocean.html;h=5407bdc816a9e68ea397f7acee2ffd2ce70c7d4d;hb=3459a8a691cb22508d7067f240b7254e588e77d3;hp=0000000000000000000000000000000000000000;hpb=5b27f1062b2203c4c31702e205f4c78e1992063e;p=jalview.git diff --git a/help/help/html/colourSchemes/gecos-ocean.html b/help/help/html/colourSchemes/gecos-ocean.html new file mode 100755 index 0000000..5407bdc --- /dev/null +++ b/help/help/html/colourSchemes/gecos-ocean.html @@ -0,0 +1,83 @@ + + + +Ocean Colour Scheme + + + + +

+ Ocean +

+

+ This colour scheme was generated by the gecos software. See
+ Kunzmann, P., Mayer, B.E. & Hamacher, K. Substitution matrix based color schemes for sequence alignment visualization. BMC Bioinformatics 21, 209 (2020). https://doi.org/10.1186/s12859-020-3526-6
+ and https://gecos.biotite-python.org/ .
+ Gecos sets perceptual differences in the colour scheme according to differences in the substitution matrix. +

+

+ ocean is a blue shifted, light color scheme, based on BLOSUM62. +

+
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
ACDE
FGHI
KLMN
PQRS
TVWY
+
+ +