X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhelp%2Fhtml%2Ffeatures%2Fclarguments.html;fp=help%2Fhelp%2Fhtml%2Ffeatures%2Fclarguments.html;h=1eecfb9738dd15ef2e4767378598e575b480a65d;hb=0c1ab6aa5767dc2ff0f40f694af9b0181148b1f5;hp=0d800cf6a3dc6b3560b1622b7bd15e58ccc1c9c8;hpb=4c27038c37db201b86fde8b1f0e950dcc6ab2517;p=jalview.git
diff --git a/help/help/html/features/clarguments.html b/help/help/html/features/clarguments.html
index 0d800cf..1eecfb9 100644
--- a/help/help/html/features/clarguments.html
+++ b/help/help/html/features/clarguments.html
@@ -34,6 +34,11 @@
parameters, then include it at the beginning of the command line to
ensure they are processed before any remaining arguments.
+ Typical command line execution follows the following pattern:
+
+ jalview -open <Alignment File/URL> [additional import arguments] [export arguments] ++
-nodisplay |
@@ -41,7 +46,11 @@
User Interface. (automatically disables questionnaire, version
and usage stats checks)
|
-open FILE/URL |
+ Specify the alignment file to
+ open or process by providing additional arguments. |
+
-props FILE/URL |
Use the given Jalview properties
|