X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhelp%2Fhtml%2Ffeatures%2Fclarguments.html;fp=help%2Fhelp%2Fhtml%2Ffeatures%2Fclarguments.html;h=60db0695f1d317bb1a164c1a8dff86b9f7ce9083;hb=e086b0c30bee5fe084186c65ef1ded42c58560f9;hp=fa273a5d1cf58f2dc6632ca1707de0890bfbe52c;hpb=e51f922b88b1f316e27cf4c19eef437ff592d74d;p=jalview.git
diff --git a/help/help/html/features/clarguments.html b/help/help/html/features/clarguments.html
index fa273a5..60db069 100644
--- a/help/help/html/features/clarguments.html
+++ b/help/help/html/features/clarguments.html
@@ -27,6 +27,12 @@
See
running Jalview from the command line
for more information.
+
+
Jalview processes arguments on the command line sequentially. If
+ you would like to pass a 'JVL' file containing
+ memory settings or any other launch
+ parameters, then include it at the beginning of the command line to
+ ensure they are processed before any remaining arguments.
- -vdoc VAMSAS DOCUMENT FILE/URL
- |
-
- Import the given vamsas document into a new session.
- - New in 2.5 - |
-
- -vsess VAMSAS SESSION URL
- |
-
- Join the given vamsas session
-
- If a document was also - specified, this will be imported first and then committed as - new data from Jalview to the specified session (Experimental - - not yet enabled!).New in 2.5 - |
-
-fasta FILE
|