X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhelp%2Fhtml%2Ffeatures%2Fgroovy.html;fp=help%2Fhelp%2Fhtml%2Ffeatures%2Fgroovy.html;h=cc9115492a3043725d96ca215130c54075356414;hb=304e64fb34b32659be1bbfd39fb4e15b2f79586e;hp=ead44369ef3f87aa2d19368b9056f2611a5880ac;hpb=cfb79b69d9fa44595560659bd95d1d1cd27677ad;p=jalview.git diff --git a/help/help/html/features/groovy.html b/help/help/html/features/groovy.html index ead4436..cc91154 100644 --- a/help/help/html/features/groovy.html +++ b/help/help/html/features/groovy.html @@ -39,7 +39,7 @@ installation of Groovy. Just select Tools→Groovy Console... from the Jalview Desktop's drop-down menu. After a short pause, you should then see the Groovy + href="https://groovy-lang.org/groovyconsole.html">Groovy Console appear. This allows you to interactively execute Groovy scripts whilst Jalview is running. We've also provided a Calculations→Execute Groovy Script button so you can execute the currently loaded @@ -101,7 +101,7 @@ print currentAlFrame.getTitle(); InstallAnywhere version of Jalview, you can find additional groovy scripts in the examples/groovy subfolder of the installation directory. The examples are also available at http://www.jalview.org/examples/groovy. + href="https://www.jalview.org/examples/groovy">https://www.jalview.org/examples/groovy.

Using Groovy to add new Alignment Calculations
We've @@ -115,8 +115,8 @@ print currentAlFrame.getTitle(); Creating custom colourschemes
You can create your own alignment colourschemes with a groovy script. We've provided two examples: