X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhelp%2Fhtml%2Freleases.html;fp=help%2Fhelp%2Fhtml%2Freleases.html;h=e02d472b33e5bf0b3e3020e479525d9057bde148;hb=c7b2143c9cf7c5e05ad63251f7d3910751b16d20;hp=e3a2a0589dc9938577fce92777a605de74534da6;hpb=caa5930cf71ef14a4af891f2c17aa4a6e0f72bcf;p=jalview.git
diff --git a/help/help/html/releases.html b/help/help/html/releases.html
index e3a2a05..e02d472 100755
--- a/help/help/html/releases.html
+++ b/help/help/html/releases.html
@@ -59,7 +59,7 @@ li:before {
2.11.2.0
- 3/03/2022 |
+ 8/03/2022
-
@@ -68,6 +68,10 @@ li:before {
Chimera.
-
+ Upgraded bundled version of Jmol
+ to 14.31.53
+
+ -
Discover 3D structure data for sequences
with Uniprot references via 3D-Beacons
@@ -100,6 +104,12 @@ li:before {
Support for Canonical Uniprot IDs
-
+ Updated Ensembl REST Client compatibility
+ to 15.2 and revised model organism names (rat, xenopus,
+ dmelanogaster now rattus_norvegicus, xenopus_tropicalis,
+ drosophila_melanogaster)
+
+ -
Sequence IDs split on '_' as well as other
non-alphanumerics when discovering database references with
'Fetch DB Refs'
@@ -133,11 +143,14 @@ li:before {
proxies that require authentication
-
+ New mechanism for opening URLs with system
+ default browser (works on OSX and Linux as well as Windows)
+
+ -
GPL license info on splash screen and About
text
-
- Jalview Native App
+ Jalview Native App
-
New Jalview Develop app - making it even easier
@@ -153,18 +166,24 @@ li:before {
than anonymous 'Java' icons
-
- Options to allow user to choose the (Swing) Look and Feel (LaF) used by Jalview
+ Options to allow user to choose the (Swing)
+ Look and Feel (LaF) used by Jalview
-
- Metal LaF used to improved operation on Linux Ubuntu with
- HiDPI display in Java 11 (still known issues with HiDPI screens in java
- 8 and 11. see JAL-3137)
+ Metal LaF used to improved
+ operation on Linux Ubuntu with HiDPI display in Java 11
+ (still known issues with HiDPI screens in java 8 and 11. see
+ JAL-3137)
-
- New command line launcher scripts (.sh, .ps1, .bat) usable on
- macOS, Linux/Unix, Windows and documentation in Help. Installer wizard has option
- to add this to PATH, or link to it in your PATH.
+ New command line launcher scripts (.sh,
+ .ps1, .bat) usable on macOS, Linux/Unix, Windows and
+ documentation in Help. Installer wizard has option to add
+ this to PATH, or link to it in your PATH.
This
+ is the recommended workaround for known issue about
+ working directory preservation when running native
+ application from command line.
+
-
Getdown launcher inherits HTTP/S proxy
@@ -173,11 +192,12 @@ li:before {
JalviewJS
-
- PDB structures mapped to Uniprot Sequences with
- SIFTS
+ PDB structures mapped to Uniprot Sequences
+ with SIFTS
-
- setprop commandline argument reinstated for JalviewJS only
+ setprop commandline argument reinstated for
+ JalviewJS only
-
Missing message bundle keys are only
@@ -188,7 +208,14 @@ li:before {
Feature type is included in the title of
the Feature Settings' Colour Chooser dialog
-
+ -
+ Build details reported in About window
+
+ -
+ Numerous minor
+ GUI additions and improvements in sync with Java
+ application.
+
Development
-
@@ -217,9 +244,7 @@ li:before {
Improved compatibility of Jalview build
with Java 17 (next LTS target)
-
-
|
@@ -235,7 +260,6 @@ li:before {
-
Annotation file: PROPERTIES apply only to
the first SEQUENCE_GROUP defined
-
-
@@ -281,23 +305,22 @@ li:before {
Standard out logging broken: messages only
routing to stderr and appear as a raw template
- JalviewJS
-
- -
- Consensus profile may include zero (rounded
- down) percentage values causing a divide by zero
-
-
-
+ Entering web service parameter values in
+ numerical field doesn't update the value of the parameter
+ until return is pressed.
-
-
-
- -
-
+ Resolved known issue (from 2.11.1.1)
+ concerning duplicate CDS sequences generated when protein
+ products for certain ENA records are repeatedly shown via
+ Calculate->Show Cross Refs
+ JalviewJS
+
-
-
+ Consensus profile may include zero (rounded
+ down) percentage values causing a divide by zero
-
JalviewJS doesn't honour arguments passed
@@ -322,13 +345,13 @@ li:before {
-
- Known Issues
+ Known Issues
-
Display of RESNUM sequence features are not
suppressed when structures associated with a sequence are
- viewed with an external viewer (Regression from 2.11.1 series)
+ viewed with an external viewer (Regression from 2.11.1
+ series)
|